Best Alignments for T0316

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1vl2A/T0316-1vl2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vl2A/T0316-1vl2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.3336e-115.75e-41 c.26.2.1
d.210.1.1
1xngA/T0316-1xngA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xngA/T0316-1xngA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8821e-087.66e-29
1wy5A/T0316-1wy5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wy5A/T0316-1wy5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.7035e-081.09e-34
1gpmA/T0316-1gpmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1gpmA/T0316-1gpmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.8698e-076.10e-24 1gpmA c.23.16.1
c.26.2.1
d.52.2.1
1ru8A/T0316-1ru8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ru8A/T0316-1ru8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6694e-061.55e-33 c.26.2.1
2d13A/T0316-2d13A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2d13A/T0316-2d13A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.5957e-061.09e-31
1ni5A/T0316-1ni5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ni5A/T0316-1ni5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.3151e-064.73e-26 c.26.2.5
d.229.1.1
1ct9A/T0316-1ct9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ct9A/T0316-1ct9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.6690e-054.89e-26 1ct9A c.26.2.1
d.153.1.1
1wxiA/T0316-1wxiA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wxiA/T0316-1wxiA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.8149e-031.01e-17
1rpnA/T0316-1rpnA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1rpnA/T0316-1rpnA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.7560e-032.17e-21 c.2.1.2

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001