Best Alignments for T0316

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1vl2A/T0316-1vl2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vl2A/T0316-1vl2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1267e-102.75e-38 c.26.2.1
d.210.1.1
1xngA/T0316-1xngA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xngA/T0316-1xngA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.3754e-101.55e-31
1wy5A/T0316-1wy5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wy5A/T0316-1wy5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1139e-086.13e-32
1gpmA/T0316-1gpmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1gpmA/T0316-1gpmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.1651e-081.70e-27 1gpmA c.23.16.1
c.26.2.1
d.52.2.1
1ru8A/T0316-1ru8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ru8A/T0316-1ru8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0145e-062.98e-38 c.26.2.1
2d13A/T0316-2d13A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2d13A/T0316-2d13A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9126e-064.43e-36
1ni5A/T0316-1ni5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ni5A/T0316-1ni5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.9564e-063.30e-27 c.26.2.5
d.229.1.1
1q15A/T0316-1q15A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1q15A/T0316-1q15A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.1653e-053.31e-17 c.26.2.1
d.153.1.1
1wxiA/T0316-1wxiA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wxiA/T0316-1wxiA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.7828e-048.99e-23
1rpnA/T0316-1rpnA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1rpnA/T0316-1rpnA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1308e-024.79e-21 c.2.1.2

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001