Best Alignments for T0316

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1korA/T0316-1korA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1korA/T0316-1korA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.9320e-179.44e-61 c.26.2.1
d.210.1.1
1wy5A/T0316-1wy5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wy5A/T0316-1wy5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8803e-166.51e-54
1ni5A/T0316-1ni5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ni5A/T0316-1ni5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.6538e-154.79e-46 c.26.2.5
d.229.1.1
1gpmA/T0316-1gpmA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1gpmA/T0316-1gpmA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.4260e-148.26e-50 1gpmA c.23.16.1
c.26.2.1
d.52.2.1
1xngA/T0316-1xngA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xngA/T0316-1xngA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.6566e-131.93e-44
2d13A/T0316-2d13A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2d13A/T0316-2d13A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.2331e-115.95e-34
1ih8A/T0316-1ih8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ih8A/T0316-1ih8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.8288e-101.10e-29 2nsyA c.26.2.1
1q15A/T0316-1q15A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1q15A/T0316-1q15A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.0425e-092.26e-24 c.26.2.1
d.153.1.1
1wxiA/T0316-1wxiA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wxiA/T0316-1wxiA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.6387e-097.60e-33
1sur/T0316-1sur-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1sur/T0316-1sur-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5482e-061.48e-22 1sur c.26.2.2

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001