Best Alignments for T0316

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1xngA/T0316-1xngA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xngA/T0316-1xngA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.5281e-014.94e-02
1csbB/T0316-1csbB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1csbB/T0316-1csbB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7133e+002.25e-09 1theB
1eal/T0316-1eal-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1eal/T0316-1eal-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.8898e+007.85e-02 1hmt b.60.1.2
2cokA/T0316-2cokA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2cokA/T0316-2cokA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.9203e+001.48e-06
1gpmA/T0316-1gpmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1gpmA/T0316-1gpmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.0885e+008.41e+00 1gpmA c.23.16.1
c.26.2.1
d.52.2.1
1aoiB/T0316-1aoiB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1aoiB/T0316-1aoiB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.1614e+001.07e-05 1aoiB a.22.1.1
1b1jA/T0316-1b1jA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1b1jA/T0316-1b1jA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.0204e+001.93e-11 7rsa d.5.1.1
1dq3A/T0316-1dq3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dq3A/T0316-1dq3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.2805e+003.32e-02 1dq3A b.86.1.2
d.50.3.1
d.95.2.2
d.95.2.2
1tif/T0316-1tif-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tif/T0316-1tif-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.5029e+004.97e-05 1tif d.15.8.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001