Best Alignments for T0316

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1ru8A/T0316-1ru8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ru8A/T0316-1ru8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.2284e-012.98e-08 c.26.2.1
2d13A/T0316-2d13A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2d13A/T0316-2d13A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.4695e-013.48e-08
1k92A/T0316-1k92A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1k92A/T0316-1k92A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.8344e-016.06e-02 c.26.2.1
d.210.1.1
1ni5A/T0316-1ni5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ni5A/T0316-1ni5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1815e+009.39e+00 c.26.2.5
d.229.1.1
1eal/T0316-1eal-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1eal/T0316-1eal-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2100e+002.51e-01 1hmt b.60.1.2
1theA/T0316-1theA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1theA/T0316-1theA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5130e+002.34e-07 1theB d.3.1.1
1wy5A/T0316-1wy5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wy5A/T0316-1wy5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5768e+001.64e-02
1xngA/T0316-1xngA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xngA/T0316-1xngA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.2646e+002.48e-01
1el5A/T0316-1el5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1el5A/T0316-1el5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.1519e+001.25e-03 1b3mA c.3.1.2
d.16.1.3
2cokA/T0316-2cokA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2cokA/T0316-2cokA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.3153e+001.74e-06

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001