Best Alignments for T0316

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1xngA/T0316-1xngA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xngA/T0316-1xngA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.4643e-025.82e-03
2a2pA/T0316-2a2pA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2a2pA/T0316-2a2pA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.5493e-011.93e-06
2cokA/T0316-2cokA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2cokA/T0316-2cokA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4578e+003.13e-08
2d13A/T0316-2d13A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2d13A/T0316-2d13A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4996e+001.60e-06
1wy5A/T0316-1wy5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wy5A/T0316-1wy5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.7650e+007.80e-03
1tif/T0316-1tif-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tif/T0316-1tif-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.1677e+001.32e-06 1tif d.15.8.1
1vl2A/T0316-1vl2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vl2A/T0316-1vl2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.3127e+008.66e-03 c.26.2.1
d.210.1.1
1ni5A/T0316-1ni5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ni5A/T0316-1ni5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.2235e+009.26e-04 c.26.2.5
d.229.1.1
1qwdA/T0316-1qwdA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1qwdA/T0316-1qwdA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.8586e+004.67e-10 b.60.1.1
1ru8A/T0316-1ru8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ru8A/T0316-1ru8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.8744e+001.84e-06 c.26.2.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001