Best Alignments for T0316

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1xngA/T0316-1xngA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xngA/T0316-1xngA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9829e-015.82e-03
2a2pA/T0316-2a2pA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2a2pA/T0316-2a2pA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.2000e-011.93e-06
1tif/T0316-1tif-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tif/T0316-1tif-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3078e+001.62e-06 1tif d.15.8.1
2cokA/T0316-2cokA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2cokA/T0316-2cokA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0512e+003.13e-08
1pmzA/T0316-1pmzA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1pmzA/T0316-1pmzA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.3692e+005.07e-03 a.39.1.10
1qwdA/T0316-1qwdA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1qwdA/T0316-1qwdA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.4103e+004.67e-10 b.60.1.1
1gpmA/T0316-1gpmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1gpmA/T0316-1gpmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.4139e+002.70e-01 1gpmA c.23.16.1
c.26.2.1
d.52.2.1
1zljA/T0316-1zljA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zljA/T0316-1zljA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.3559e+001.33e-02
1xcbA/T0316-1xcbA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xcbA/T0316-1xcbA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.4517e+009.21e-06 a.4.5.38
c.2.1.12
1wdcC/T0316-1wdcC-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wdcC/T0316-1wdcC-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.7692e+001.32e-06 1wdcC a.39.1.5

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001