Best Alignments for T0316

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1xngA/T0316-1xngA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xngA/T0316-1xngA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.6220e-027.76e-02
1ni5A/T0316-1ni5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ni5A/T0316-1ni5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0935e-012.12e-02 c.26.2.5
d.229.1.1
2d13A/T0316-2d13A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2d13A/T0316-2d13A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7634e-017.06e-05
1k92A/T0316-1k92A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1k92A/T0316-1k92A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.3788e-011.39e-02 c.26.2.1
d.210.1.1
1wy5A/T0316-1wy5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wy5A/T0316-1wy5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.0205e-018.01e-03
1ru8A/T0316-1ru8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ru8A/T0316-1ru8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.3300e-013.27e-03 c.26.2.1
2a2pA/T0316-2a2pA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2a2pA/T0316-2a2pA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5454e+009.80e-06
1tif/T0316-1tif-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tif/T0316-1tif-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.8454e+001.32e-06 1tif d.15.8.1
2cokA/T0316-2cokA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2cokA/T0316-2cokA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.8990e+008.72e-08
1qwdA/T0316-1qwdA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1qwdA/T0316-1qwdA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.9984e+002.50e-09 b.60.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001