Best Alignments for T0316

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1d2eA/T0316-1d2eA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1d2eA/T0316-1d2eA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0845e+004.30e-06 1efcA b.43.3.1
b.44.1.1
c.37.1.8
2fhxA/T0316-2fhxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fhxA/T0316-2fhxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.4009e+002.58e-02
2c78A/T0316-2c78A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2c78A/T0316-2c78A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.4045e+004.41e-06
1yhfA/T0316-1yhfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yhfA/T0316-1yhfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.8460e+009.65e-02
1ok0A/T0316-1ok0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ok0A/T0316-1ok0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.5440e+005.26e+01 b.5.1.1
1jjeA/T0316-1jjeA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jjeA/T0316-1jjeA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1506e+012.01e-03 1a7tA d.157.1.1
1x8hA/T0316-1x8hA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1x8hA/T0316-1x8hA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1524e+016.29e-01
1ao5A/T0316-1ao5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ao5A/T0316-1ao5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4091e+012.34e+00 5ptp b.47.1.2
1v6fA/T0316-1v6fA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1v6fA/T0316-1v6fA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4691e+013.21e+03 d.109.1.2
1zn8A/T0316-1zn8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zn8A/T0316-1zn8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6047e+011.95e+02

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001