Best Alignments for T0316

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1yhfA/T0316-1yhfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yhfA/T0316-1yhfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.3163e-014.82e-01
1ok0A/T0316-1ok0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ok0A/T0316-1ok0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.5346e-012.16e+01 b.5.1.1
2c78A/T0316-2c78A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2c78A/T0316-2c78A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.2702e-016.82e-11
1oaqL/T0316-1oaqL-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1oaqL/T0316-1oaqL-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.9815e-015.75e+01 b.1.1.1
2fhxA/T0316-2fhxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fhxA/T0316-2fhxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2651e+005.27e-06
1zn8A/T0316-1zn8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zn8A/T0316-1zn8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7098e+002.84e+00
1m2xA/T0316-1m2xA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1m2xA/T0316-1m2xA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8152e+001.63e-05 d.157.1.1
1x8hA/T0316-1x8hA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1x8hA/T0316-1x8hA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.1061e+003.47e-03
1kk1A/T0316-1kk1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1kk1A/T0316-1kk1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.8595e+001.83e-08 b.43.3.1
b.44.1.1
c.37.1.8
1wh0A/T0316-1wh0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wh0A/T0316-1wh0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.3172e+006.18e+01

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001