Best Alignments for T0316

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1d2eA/T0316-1d2eA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1d2eA/T0316-1d2eA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.6313e-022.93e-11 1efcA b.43.3.1
b.44.1.1
c.37.1.8
2c78A/T0316-2c78A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2c78A/T0316-2c78A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.3371e-018.42e-11
2fhxA/T0316-2fhxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fhxA/T0316-2fhxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0932e+008.06e-06
1ok0A/T0316-1ok0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ok0A/T0316-1ok0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.7711e+002.51e+01 b.5.1.1
1yhfA/T0316-1yhfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yhfA/T0316-1yhfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.0594e+006.01e-01
1m2xA/T0316-1m2xA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1m2xA/T0316-1m2xA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.1437e+002.72e-05 d.157.1.1
1oaqL/T0316-1oaqL-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1oaqL/T0316-1oaqL-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.9164e+005.35e+01 b.1.1.1
1x8hA/T0316-1x8hA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1x8hA/T0316-1x8hA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.0018e+005.96e-03
4xiaA/T0316-4xiaA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 4xiaA/T0316-4xiaA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.6700e+001.98e+03 4xis c.1.15.3
1v6fA/T0316-1v6fA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1v6fA/T0316-1v6fA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.7266e+002.46e+02 d.109.1.2

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001