Best Alignments for T0316

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1xngA/T0316-1xngA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xngA/T0316-1xngA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.5770e-021.32e-03
1d2eA/T0316-1d2eA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1d2eA/T0316-1d2eA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1072e+001.15e-21 1efcA b.43.3.1
b.44.1.1
c.37.1.8
1vl2A/T0316-1vl2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vl2A/T0316-1vl2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1963e+001.87e-05 c.26.2.1
d.210.1.1
1dq3A/T0316-1dq3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dq3A/T0316-1dq3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3008e+001.80e-07 1dq3A b.86.1.2
d.50.3.1
d.95.2.2
d.95.2.2
1ni5A/T0316-1ni5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ni5A/T0316-1ni5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.4781e+006.42e-07 c.26.2.5
d.229.1.1
2d13A/T0316-2d13A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2d13A/T0316-2d13A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.1614e+003.24e-09
1wy5A/T0316-1wy5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wy5A/T0316-1wy5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.8013e+003.74e-03
2c78A/T0316-2c78A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2c78A/T0316-2c78A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.0675e+005.69e-20
1yhfA/T0316-1yhfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yhfA/T0316-1yhfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.9641e+003.56e-04
2cokA/T0316-2cokA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2cokA/T0316-2cokA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.1010e+002.23e-07

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001