Best Alignments for T0316

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1xngA/T0316-1xngA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xngA/T0316-1xngA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4745e-014.10e-03
1dq3A/T0316-1dq3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dq3A/T0316-1dq3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.0002e-011.80e-07 1dq3A b.86.1.2
d.50.3.1
d.95.2.2
d.95.2.2
1yhfA/T0316-1yhfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yhfA/T0316-1yhfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.5265e+003.56e-04
1wh0A/T0316-1wh0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wh0A/T0316-1wh0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.6307e+006.67e-03
1zvnA/T0316-1zvnA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zvnA/T0316-1zvnA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.0689e+001.04e-04
2a2pA/T0316-2a2pA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2a2pA/T0316-2a2pA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.1511e+002.26e-04
1kk1A/T0316-1kk1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1kk1A/T0316-1kk1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.2285e+001.50e-14 b.43.3.1
b.44.1.1
c.37.1.8
2cokA/T0316-2cokA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2cokA/T0316-2cokA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.2686e+004.63e-07
1gmyA/T0316-1gmyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1gmyA/T0316-1gmyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.8175e+001.03e-07 d.3.1.1
2d13A/T0316-2d13A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2d13A/T0316-2d13A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.6256e+003.24e-09

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001