Best Alignments for T0316

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1k92A/T0316-1k92A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1k92A/T0316-1k92A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.0169e-021.75e-03 c.26.2.1
d.210.1.1
1ni5A/T0316-1ni5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ni5A/T0316-1ni5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.2816e-023.64e-05 c.26.2.5
d.229.1.1
1d2eA/T0316-1d2eA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1d2eA/T0316-1d2eA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.9572e-021.15e-21 1efcA b.43.3.1
b.44.1.1
c.37.1.8
1xngA/T0316-1xngA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xngA/T0316-1xngA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2511e-013.55e-03
2d13A/T0316-2d13A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2d13A/T0316-2d13A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.6474e-016.01e-09
1ru8A/T0316-1ru8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ru8A/T0316-1ru8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.0634e-014.98e-07 c.26.2.1
1wy5A/T0316-1wy5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wy5A/T0316-1wy5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.0059e-018.32e-03
1dq3A/T0316-1dq3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dq3A/T0316-1dq3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5619e+005.96e-07 1dq3A b.86.1.2
d.50.3.1
d.95.2.2
d.95.2.2
1eal/T0316-1eal-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1eal/T0316-1eal-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.9100e+001.96e+03 1hmt b.60.1.2
2c78A/T0316-2c78A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2c78A/T0316-2c78A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.8983e+005.69e-20

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001