Best Alignments for T0315

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1j6oA/T0315-1j6oA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1j6oA/T0315-1j6oA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4033e-282.44e-152 c.1.9.12
1yixA/T0315-1yixA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yixA/T0315-1yixA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5660e-283.08e-155
1xwyA/T0315-1xwyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xwyA/T0315-1xwyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.5034e-273.18e-153
1zzmA/T0315-1zzmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zzmA/T0315-1zzmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.9022e-271.91e-151
1bf6A/T0315-1bf6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1bf6A/T0315-1bf6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0541e-162.17e-92 1pscA c.1.9.3
1xrtA/T0315-1xrtA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xrtA/T0315-1xrtA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9895e-086.39e-55
2f6kA/T0315-2f6kA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f6kA/T0315-2f6kA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2073e-071.17e-50
2gwgA/T0315-2gwgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gwgA/T0315-2gwgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1271e-072.13e-46
1gkpA/T0315-1gkpA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1gkpA/T0315-1gkpA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.7110e-071.20e-32 b.92.1.3
c.1.9.6
2gokA/T0315-2gokA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gokA/T0315-2gokA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4806e-061.35e-49

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001