Best Alignments for T0314

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1kshA/T0314-1kshA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1kshA/T0314-1kshA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.3041e+002.40e-04 c.37.1.8
1zi8A/T0314-1zi8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zi8A/T0314-1zi8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.9402e+002.20e+00
1ggvA/T0314-1ggvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ggvA/T0314-1ggvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.7063e+008.99e+00 1din c.69.1.9
1itcA/T0314-1itcA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1itcA/T0314-1itcA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0781e+011.46e+02 b.3.1.1
c.1.8.1
1vemA/T0314-1vemA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vemA/T0314-1vemA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1390e+015.62e+00
1venA/T0314-1venA-t2k-local-adpstyle1.a2m 1venA/T0314-1venA-t2k-local-adpstyle1.al 1.6550e+012.08e+00
1vepA/T0314-1vepA-t2k-local-adpstyle1.a2m 1vepA/T0314-1vepA-t2k-local-adpstyle1.al 1.6564e+012.08e+00
1veoA/T0314-1veoA-t2k-local-adpstyle1.a2m 1veoA/T0314-1veoA-t2k-local-adpstyle1.al 1.6578e+012.09e+00
2cb2A/T0314-2cb2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2cb2A/T0314-2cb2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.6882e+014.11e+03
2f1kA/T0314-2f1kA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f1kA/T0314-2f1kA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.3083e+013.27e-01

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001