Best Alignments for T0314

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1vemA/T0314-1vemA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vemA/T0314-1vemA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5113e+004.99e+00
1kshA/T0314-1kshA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1kshA/T0314-1kshA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.5452e+002.42e-04 c.37.1.8
1din/T0314-1din-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1din/T0314-1din-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.1923e+009.22e+00 1din c.69.1.9
1zi8A/T0314-1zi8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zi8A/T0314-1zi8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.9623e+001.47e+00
2cb2A/T0314-2cb2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2cb2A/T0314-2cb2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.1413e+002.94e+03
2f1kA/T0314-2f1kA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f1kA/T0314-2f1kA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0742e+011.43e-01
1g5bA/T0314-1g5bA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1g5bA/T0314-1g5bA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8008e+011.38e-02 1g5bA d.159.1.3
1o17A/T0314-1o17A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1o17A/T0314-1o17A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8240e+011.17e+01 a.46.2.1
c.27.1.1
1ig5A/T0314-1ig5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ig5A/T0314-1ig5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.2202e+012.55e-01 4icb a.39.1.1
1q15A/T0314-1q15A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1q15A/T0314-1q15A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3628e+011.37e+02 c.26.2.1
d.153.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001