Best Alignments for T0314

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1ggvA/T0314-1ggvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ggvA/T0314-1ggvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.3400e+009.89e+00 1din c.69.1.9
1itcA/T0314-1itcA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1itcA/T0314-1itcA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.0677e+001.50e+02 b.3.1.1
c.1.8.1
1vemA/T0314-1vemA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vemA/T0314-1vemA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.7927e+006.77e+00
1kshA/T0314-1kshA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1kshA/T0314-1kshA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.4172e+003.28e-04 c.37.1.8
1venA/T0314-1venA-t04-local-adpstyle1.a2m 1venA/T0314-1venA-t04-local-adpstyle1.al 9.4842e+001.61e+00
1vepA/T0314-1vepA-t04-local-adpstyle1.a2m 1vepA/T0314-1vepA-t04-local-adpstyle1.al 9.4842e+001.61e+00
1veoA/T0314-1veoA-t04-local-adpstyle1.a2m 1veoA/T0314-1veoA-t04-local-adpstyle1.al 9.5013e+001.62e+00
1exnA/T0314-1exnA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1exnA/T0314-1exnA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6200e+011.06e+04 1exnA a.60.7.1
c.120.1.2
4icb/T0314-4icb-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 4icb/T0314-4icb-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8083e+012.93e-02 4icb a.39.1.1
1b89A/T0314-1b89A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1b89A/T0314-1b89A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8400e+015.45e+02 1b89A a.118.1.3

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001