Best Alignments for T0310

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1o04A/T0310-1o04A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1o04A/ 6.4236e-541.74e-203 c.82.1.1
2bjkA/T0310-2bjkA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bjkA/ 1.6509e-464.41e-180
1kaeA/T0310-1kaeA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1kaeA/ 4.4840e-116.99e-64 c.82.1.2
1zumA/T0310-1zumA-t06-global-adpstyle1.a2m 1zumA/ 1.6266e-022.03e-104
1wndA/T0310-1wndA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wndA/ 1.8454e-023.79e-196
2d4eA/T0310-2d4eA-t06-global-adpstyle1.a2m 2d4eA/ 1.9265e-022.03e-104
2esdA/T0310-2esdA-t06-global-adpstyle1.a2m 2esdA/ 5.3747e-022.03e-104
1t90A/T0310-1t90A-t06-global-adpstyle1.a2m 1t90A/ 5.6729e-022.03e-104

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001