Best Alignments for T0310

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1bxsA/T0310-1bxsA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1bxsA/ 2.6700e-473.76e-197 1bpwA c.82.1.1
1wndA/T0310-1wndA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wndA/ 2.0020e-382.02e-190
2bjkA/T0310-2bjkA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bjkA/ 3.4386e-302.01e-165
1zumA/T0310-1zumA-t04-global-adpstyle1.a2m 1zumA/ 7.8030e-236.87e-111
2d4eA/T0310-2d4eA-t04-global-adpstyle1.a2m 2d4eA/ 7.3531e-226.87e-111
1t90A/T0310-1t90A-t04-global-adpstyle1.a2m 1t90A/ 8.3557e-196.87e-111
2esdA/T0310-2esdA-t04-global-adpstyle1.a2m 2esdA/ 3.0234e-185.55e-107
1kaeA/T0310-1kaeA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1kaeA/ 3.7162e-053.97e-56 c.82.1.2

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001