Best Alignments for T0309

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2bdtA/T0309-2bdtA-t04-global-adpstyle1.a2m 2bdtA/T0309-2bdtA-t04-global-adpstyle1.al 1.0170e+001.65e-05
1pe0A/T0309-1pe0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1pe0A/T0309-1pe0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0200e+001.78e+02 c.23.16.2
2bdqA/T0309-2bdqA-t04-global-adpstyle1.a2m 2bdqA/T0309-2bdqA-t04-global-adpstyle1.al 1.5397e+004.35e-04
1hyuA/T0309-1hyuA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1hyuA/T0309-1hyuA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.2170e+009.48e-02 1hyuA c.3.1.5
c.3.1.5
c.47.1.2
c.47.1.2
1kkdA/T0309-1kkdA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1kkdA/T0309-1kkdA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.1000e+006.97e+01 f.15.1.1
1zynA/T0309-1zynA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zynA/T0309-1zynA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.4638e+003.76e+00
1mejA/T0309-1mejA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1mejA/T0309-1mejA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.8000e+002.61e+01 c.65.1.1
1tf7A/T0309-1tf7A-t04-local-adpstyle1.a2m 1tf7A/T0309-1tf7A-t04-local-adpstyle1.al 4.9020e+003.01e-01 c.37.1.11
c.37.1.11
2d1uA/T0309-2d1uA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2d1uA/T0309-2d1uA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.7248e+004.39e-03
1tzaA/T0309-1tzaA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tzaA/T0309-1tzaA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.7337e+001.16e-04 b.1.23.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001