PFRMAT RR
TARGET T0309
AUTHOR SAM-T07
REMARK From group SAM-TO6 under the direction of
REMARK Kevin Karplus.
REMARK Residue-residue contact predictions
REMARK  by George Shackelford and Kevin Karplus
REMARK The value given is an approximation of the probability
REMARK as provided by the neural network.
REMARK The predictions are limited to a score >= .18 which
REMARK is an approximation of the probability.
REMARK
METHOD The predictor is an artificial neural network.
METHOD NN: con.aa7str2_7near3nsep5.47.data03.net
METHOD Inputs may include separation and sequence length,
METHOD e-value statistic based on mutual information values,
METHOD a statistic based on propensity of residues in contact.
METHOD Other inputs are distributions from alignments and
METHOD secondary predictions from SAM-t04 and/or SAM-t06 of
METHOD the University of California, Santa Cruz
MODEL 1
MASKKVHQINVKGFFDMDVMEVTEQTKEAEYTYDFKEILSEFNGKNVSIT
VKEENELPVKGVEMAGDPLEHHHHHH
4 13 0 8 0.617542
4 14 0 8 0.605529
4 15 0 8 0.622202
4 16 0 8 0.597554
4 17 0 8 0.621869
4 18 0 8 0.57899
4 19 0 8 0.607938
4 20 0 8 0.553358
4 22 0 8 0.630352
4 23 0 8 0.551831
4 25 0 8 0.551854
4 29 0 8 0.603566
4 31 0 8 0.623729
4 49 0 8 0.584614
4 51 0 8 0.595786
5 14 0 8 0.63065
5 15 0 8 0.638783
5 16 0 8 0.638736
5 17 0 8 0.653685
5 18 0 8 0.615051
5 19 0 8 0.611888
5 20 0 8 0.568978
5 21 0 8 0.564611
5 22 0 8 0.635077
5 23 0 8 0.617817
5 24 0 8 0.589005
5 25 0 8 0.585452
5 26 0 8 0.560698
5 29 0 8 0.598973
5 31 0 8 0.631074
5 49 0 8 0.599805
5 50 0 8 0.584492
5 51 0 8 0.678051
5 52 0 8 0.6535
5 53 0 8 0.616807
6 15 0 8 0.787213
6 16 0 8 0.71848
6 17 0 8 0.751152
6 18 0 8 0.686437
6 19 0 8 0.749996
6 20 0 8 0.673813
6 21 0 8 0.63775
6 22 0 8 0.783659
6 23 0 8 0.6741
6 24 0 8 0.624863
6 25 0 8 0.637075
6 26 0 8 0.645418
6 27 0 8 0.580863
6 28 0 8 0.557522
6 29 0 8 0.722944
6 30 0 8 0.58292
6 31 0 8 0.747474
6 32 0 8 0.579358
6 33 0 8 0.588423
6 35 0 8 0.638076
6 38 0 8 0.662024
6 39 0 8 0.56037
6 42 0 8 0.575469
6 47 0 8 0.633442
6 49 0 8 0.756021
6 50 0 8 0.662241
6 51 0 8 0.779361
6 52 0 8 0.668514
6 53 0 8 0.613018
6 59 0 8 0.598671
6 62 0 8 0.625431
6 64 0 8 0.596255
7 16 0 8 0.751056
7 17 0 8 0.775839
7 18 0 8 0.718911
7 19 0 8 0.762701
7 20 0 8 0.69668
7 21 0 8 0.65874
7 22 0 8 0.781362
7 23 0 8 0.688217
7 24 0 8 0.642054
7 25 0 8 0.651096
7 26 0 8 0.661609
7 27 0 8 0.596216
7 28 0 8 0.580207
7 29 0 8 0.726331
7 30 0 8 0.594094
7 31 0 8 0.745168
7 32 0 8 0.577178
7 33 0 8 0.581733
7 35 0 8 0.610272
7 38 0 8 0.631947
7 42 0 8 0.579554
7 47 0 8 0.627123
7 48 0 8 0.565867
7 49 0 8 0.740933
7 50 0 8 0.661744
7 51 0 8 0.756135
7 52 0 8 0.654742
7 53 0 8 0.592907
7 59 0 8 0.576224
7 62 0 8 0.591882
7 64 0 8 0.561995
8 17 0 8 0.777134
8 18 0 8 0.735537
8 19 0 8 0.756325
8 20 0 8 0.713634
8 21 0 8 0.672874
8 22 0 8 0.758033
8 23 0 8 0.69464
8 24 0 8 0.645975
8 25 0 8 0.64808
8 26 0 8 0.663338
8 27 0 8 0.610885
8 28 0 8 0.598997
8 29 0 8 0.72436
8 30 0 8 0.616835
8 31 0 8 0.7348
8 32 0 8 0.576549
8 33 0 8 0.55653
8 47 0 8 0.660344
8 48 0 8 0.642177
8 49 0 8 0.7678
8 50 0 8 0.714816
8 51 0 8 0.766215
8 52 0 8 0.678938
8 53 0 8 0.605532
8 59 0 8 0.597073
8 61 0 8 0.585845
8 62 0 8 0.60002
8 63 0 8 0.55354
8 64 0 8 0.556091
9 18 0 8 0.774853
9 19 0 8 0.84496
9 20 0 8 0.782523
9 21 0 8 0.713762
9 22 0 8 0.856147
9 23 0 8 0.711467
9 24 0 8 0.641532
9 25 0 8 0.684358
9 26 0 8 0.727509
9 27 0 8 0.662317
9 28 0 8 0.640778
9 29 0 8 0.81094
9 30 0 8 0.640977
9 31 0 8 0.819343
9 32 0 8 0.600946
9 33 0 8 0.616252
9 35 0 8 0.693409
9 38 0 8 0.695173
9 39 0 8 0.606966
9 42 0 8 0.624295
9 46 0 8 0.586545
9 47 0 8 0.773068
9 48 0 8 0.698718
9 49 0 8 0.852159
9 50 0 8 0.753463
9 51 0 8 0.809399
9 52 0 8 0.617818
9 57 0 8 0.582457
9 59 0 8 0.708863
9 61 0 8 0.626286
9 62 0 8 0.694861
9 63 0 8 0.59581
9 64 0 8 0.645797
10 19 0 8 0.74049
10 20 0 8 0.689719
10 21 0 8 0.632708
10 22 0 8 0.689375
10 23 0 8 0.60498
10 24 0 8 0.565881
10 25 0 8 0.592964
10 26 0 8 0.619601
10 27 0 8 0.576512
10 28 0 8 0.568429
10 29 0 8 0.666479
10 30 0 8 0.563154
10 31 0 8 0.664316
10 47 0 8 0.667283
10 48 0 8 0.641436
10 49 0 8 0.711717
10 50 0 8 0.650089
10 51 0 8 0.635079
10 59 0 8 0.550752
10 61 0 8 0.550745
11 20 0 8 0.784494
11 21 0 8 0.714735
11 22 0 8 0.850262
11 23 0 8 0.679554
11 24 0 8 0.630679
11 25 0 8 0.687392
11 26 0 8 0.72766
11 27 0 8 0.67072
11 28 0 8 0.642551
11 29 0 8 0.799617
11 30 0 8 0.626398
11 31 0 8 0.805242
11 32 0 8 0.599972
11 33 0 8 0.615518
11 35 0 8 0.703142
11 38 0 8 0.716905
11 39 0 8 0.621776
11 42 0 8 0.638024
11 46 0 8 0.605608
11 47 0 8 0.779495
11 48 0 8 0.680021
11 49 0 8 0.821751
11 50 0 8 0.686473
11 51 0 8 0.738705
11 57 0 8 0.567644
11 59 0 8 0.683389
11 61 0 8 0.595594
11 62 0 8 0.647319
11 64 0 8 0.611022
12 21 0 8 0.638301
12 22 0 8 0.679193
12 23 0 8 0.612543
12 24 0 8 0.592748
12 25 0 8 0.617513
12 26 0 8 0.618646
12 27 0 8 0.574318
12 28 0 8 0.564326
12 29 0 8 0.641021
12 30 0 8 0.555814
12 31 0 8 0.648486
12 47 0 8 0.611995
12 48 0 8 0.571924
12 49 0 8 0.625993
12 50 0 8 0.5674
12 51 0 8 0.57466
13 22 0 8 0.732161
13 23 0 8 0.672434
13 24 0 8 0.640482
13 25 0 8 0.655172
13 26 0 8 0.647348
13 27 0 8 0.600958
13 28 0 8 0.583925
13 29 0 8 0.672529
13 30 0 8 0.602565
13 31 0 8 0.694278
13 32 0 8 0.613419
13 33 0 8 0.596625
13 35 0 8 0.563263
13 47 0 8 0.630507
13 48 0 8 0.599571
13 49 0 8 0.676924
13 50 0 8 0.630484
13 51 0 8 0.667462
13 52 0 8 0.60977
13 53 0 8 0.587231
13 59 0 8 0.550585
13 64 0 8 0.552149
14 23 0 8 0.709254
14 24 0 8 0.664215
14 25 0 8 0.693262
14 26 0 8 0.702376
14 27 0 8 0.646338
14 28 0 8 0.621684
14 29 0 8 0.742811
14 30 0 8 0.641761
14 31 0 8 0.765567
14 32 0 8 0.646472
14 33 0 8 0.634114
14 35 0 8 0.68846
14 38 0 8 0.687865
14 39 0 8 0.571871
14 46 0 8 0.551248
14 47 0 8 0.704468
14 48 0 8 0.633213
14 49 0 8 0.748456
14 50 0 8 0.662562
14 51 0 8 0.712751
14 52 0 8 0.597098
14 53 0 8 0.572676
14 59 0 8 0.606898
14 61 0 8 0.564715
14 62 0 8 0.638616
14 63 0 8 0.573089
14 64 0 8 0.631567
15 24 0 8 0.685629
15 25 0 8 0.724477
15 26 0 8 0.740057
15 27 0 8 0.678976
15 28 0 8 0.651793
15 29 0 8 0.783593
15 30 0 8 0.663066
15 31 0 8 0.803173
15 32 0 8 0.665299
15 33 0 8 0.661278
15 34 0 8 0.55548
15 35 0 8 0.74635
15 38 0 8 0.767049
15 39 0 8 0.665793
15 42 0 8 0.598669
15 46 0 8 0.572873
15 47 0 8 0.732832
15 48 0 8 0.639749
15 49 0 8 0.771253
15 50 0 8 0.662157
15 51 0 8 0.722481
15 52 0 8 0.572977
15 53 0 8 0.553379
15 57 0 8 0.551944
15 59 0 8 0.629402
15 61 0 8 0.566411
15 62 0 8 0.66301
15 63 0 8 0.576097
15 64 0 8 0.650394
16 25 0 8 0.703207
16 26 0 8 0.704569
16 27 0 8 0.652132
16 28 0 8 0.632264
16 29 0 8 0.725805
16 30 0 8 0.644996
16 31 0 8 0.743723
16 32 0 8 0.644871
16 33 0 8 0.622724
16 35 0 8 0.62988
16 38 0 8 0.574212
16 46 0 8 0.547805
16 47 0 8 0.669166
16 48 0 8 0.62375
16 49 0 8 0.698349
16 50 0 8 0.638498
16 51 0 8 0.658937
16 52 0 8 0.575062
16 53 0 8 0.555029
16 59 0 8 0.56105
16 62 0 8 0.557734
16 64 0 8 0.575086
17 26 0 8 0.714156
17 27 0 8 0.66035
17 28 0 8 0.632565
17 29 0 8 0.753457
17 30 0 8 0.638754
17 31 0 8 0.765526
17 32 0 8 0.639413
17 33 0 8 0.634029
17 35 0 8 0.672072
17 38 0 8 0.682591
17 39 0 8 0.572487
17 42 0 8 0.565433
17 46 0 8 0.554171
17 47 0 8 0.694717
17 48 0 8 0.627556
17 49 0 8 0.742064
17 50 0 8 0.645008
17 51 0 8 0.694787
17 52 0 8 0.587542
17 53 0 8 0.563719
17 59 0 8 0.600322
17 61 0 8 0.55679
17 62 0 8 0.587598
17 64 0 8 0.585373
18 27 0 8 0.636777
18 28 0 8 0.616439
18 29 0 8 0.702532
18 30 0 8 0.636173
18 31 0 8 0.721452
18 32 0 8 0.646257
18 33 0 8 0.627101
18 35 0 8 0.601416
18 47 0 8 0.631272
18 48 0 8 0.599935
18 49 0 8 0.676036
18 50 0 8 0.636269
18 51 0 8 0.674468
18 52 0 8 0.623694
18 53 0 8 0.597237
18 64 0 8 0.560554
19 28 0 8 0.679888
19 29 0 8 0.817183
19 30 0 8 0.690959
19 31 0 8 0.828395
19 32 0 8 0.694504
19 33 0 8 0.694451
19 34 0 8 0.569286
19 35 0 8 0.7508
19 38 0 8 0.765318
19 39 0 8 0.662249
19 42 0 8 0.635702
19 46 0 8 0.571507
19 47 0 8 0.737961
19 48 0 8 0.65367
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19 50 0 8 0.691273
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19 59 0 8 0.65006
19 61 0 8 0.58243
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20 29 0 8 0.798593
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20 32 0 8 0.679837
20 33 0 8 0.667367
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20 52 0 8 0.624359
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21 30 0 8 0.654205
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21 32 0 8 0.632275
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22 31 0 8 0.852083
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22 35 0 8 0.767855
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22 51 0 8 0.756482
22 52 0 8 0.56927
22 57 0 8 0.599797
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22 61 0 8 0.616248
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22 64 0 8 0.649925
23 32 0 8 0.622899
23 33 0 8 0.602131
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24 33 0 8 0.573097
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25 35 0 8 0.620383
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25 51 0 8 0.67216
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25 53 0 8 0.590005
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26 35 0 8 0.668823
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27 38 0 8 0.648731
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53 62 0 8 0.750347
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55 64 0 8 0.687984
55 65 0 8 0.658556
56 65 0 8 0.646052
57 66 0 8 0.577092
57 69 0 8 0.595055
57 71 0 8 0.603656
57 72 0 8 0.563199
57 73 0 8 0.565508
59 69 0 8 0.643793
59 71 0 8 0.653503
59 72 0 8 0.606823
59 73 0 8 0.600501
61 71 0 8 0.55839
62 71 0 8 0.76163
62 72 0 8 0.706892
62 73 0 8 0.693508
63 72 0 8 0.693873
63 73 0 8 0.687326
64 73 0 8 0.696758
END