Best Alignments for T0308

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1r2qA/T0308-1r2qA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1r2qA/T0308-1r2qA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.8724e-201.25e-94 c.37.1.8
2bcgY/T0308-2bcgY-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bcgY/T0308-2bcgY-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4761e-193.20e-87
2a5dA/T0308-2a5dA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2a5dA/T0308-2a5dA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1406e-198.25e-87
1x3sA/T0308-1x3sA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1x3sA/T0308-1x3sA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.0278e-191.99e-86
2bmeA/T0308-2bmeA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bmeA/T0308-2bmeA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.6658e-191.07e-88
2f9lA/T0308-2f9lA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f9lA/T0308-2f9lA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.2856e-199.66e-89
1z0jA/T0308-1z0jA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z0jA/T0308-1z0jA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.9384e-193.06e-91
2a5jA/T0308-2a5jA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2a5jA/T0308-2a5jA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.9967e-193.53e-88
2gf9A/T0308-2gf9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gf9A/T0308-2gf9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.2738e-192.42e-85
1yzqA/T0308-1yzqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yzqA/T0308-1yzqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3229e-182.95e-86

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001