Best Alignments for T0308

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1x3sA/T0308-1x3sA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1x3sA/T0308-1x3sA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.3412e-193.35e-77
2bcgY/T0308-2bcgY-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bcgY/T0308-2bcgY-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.5621e-198.46e-77
1ek0A/T0308-1ek0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ek0A/T0308-1ek0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.5961e-191.36e-84 1ctqA c.37.1.8
2f9lA/T0308-2f9lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f9lA/T0308-2f9lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.2168e-194.44e-80
2bmeA/T0308-2bmeA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bmeA/T0308-2bmeA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.3312e-193.36e-82
1yzqA/T0308-1yzqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yzqA/T0308-1yzqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.5708e-191.57e-81
2gf9A/T0308-2gf9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gf9A/T0308-2gf9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0601e-181.14e-77
2a5jA/T0308-2a5jA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2a5jA/T0308-2a5jA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1656e-181.26e-75
1z06A/T0308-1z06A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z06A/T0308-1z06A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5405e-182.17e-76
1z0jA/T0308-1z0jA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z0jA/T0308-1z0jA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9297e-183.13e-82

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001