Best Alignments for T0307

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1svmA/T0307-1svmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1svmA/T0307-1svmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.3539e-011.80e-04
1ff9A/T0307-1ff9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ff9A/T0307-1ff9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7505e+002.55e-02 1ff9A c.2.1.3
d.81.1.2
256bA/T0307-256bA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 256bA/T0307-256bA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8056e+003.59e-03 256bA a.24.3.1
2ap1A/T0307-2ap1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ap1A/T0307-2ap1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.7127e+003.45e-04
1ugpA/T0307-1ugpA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ugpA/T0307-1ugpA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.5927e+007.66e-03 d.149.1.1
1e7lA/T0307-1e7lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1e7lA/T0307-1e7lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.0432e+001.78e-02 1en7A a.140.4.1
d.4.1.5
1pmi/T0307-1pmi-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1pmi/T0307-1pmi-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.2952e+003.72e-02 1pmi b.82.1.3
2cosA/T0307-2cosA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2cosA/T0307-2cosA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.3962e+004.42e-01
1auiB/T0307-1auiB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1auiB/T0307-1auiB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1565e+011.93e-08 1auiB a.39.1.5
1oksA/T0307-1oksA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1oksA/T0307-1oksA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1636e+015.91e-01 a.8.5.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001