Best Alignments for T0306

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2ae0X/T0306-2ae0X-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ae0X/T0306-2ae0X-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7859e+004.47e-06
2gaeA/T0306-2gaeA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gaeA/T0306-2gaeA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.1452e+003.25e-04
2c3mA/T0306-2c3mA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2c3mA/T0306-2c3mA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.3608e+006.98e-02
1kekA/T0306-1kekA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1kekA/T0306-1kekA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.9228e+001.48e-01 c.36.1.8
c.36.1.12
c.48.1.3
c.64.1.1
d.58.1.5
1v04A/T0306-1v04A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1v04A/T0306-1v04A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8054e+011.04e-03 b.68.6.2
1xpkA/T0306-1xpkA-t2k-global-adpstyle1.a2m 1xpkA/T0306-1xpkA-t2k-global-adpstyle1.al 2.6564e+012.04e-03
1wucA/T0306-1wucA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wucA/T0306-1wucA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.3602e+015.71e+00
1wi1A/T0306-1wi1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wi1A/T0306-1wi1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.5247e+013.42e-02
1h0cA/T0306-1h0cA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1h0cA/T0306-1h0cA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.6543e+011.25e-03 c.67.1.3
1mrj/T0306-1mrj-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1mrj/T0306-1mrj-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.8967e+013.67e-04 1mrj d.165.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001