(c) 1992-2000 Regents of the University of California, Santa Cruz
Sequence Alignment and Modeling Software System
http://www.soe.ucsc.edu/research/compbio/sam.html

Citations (SAM, SAM-T99, HMMs)

Sequence numbers correspond to the following labels:

    • T0306 ER316, E. Coli, 95 res
                 10        20             30                         40
                 |         |              |                          |
   1 ...MKLAVVTGQIVCTVRHHGLAHDKL.....LMVEMI.....DPQG.N....P.D.....G.QC
   2 ...MKLAVVTGQIVCTVRHHGLAHDKL.....LMVEMI.....DPQG.N....P.D.....G.QC
   3 ...MKLAVVTGQIVCTVRHHGLAHDKL.....LMVEMI.....DPHG.N....P.D.....G.QC
   4 ...MKLAVVTGQIVCTVRHQGLAHDKL.....LMVEMI.....DAQG.N....P.D.....G.QC
   5 ...MQIAKVRGTVVSTQKDPSLRGVKL.....LLLQLV.....DEEG.N....L.L.....Q.KY
   6 ...MQIAKVRGTVVSTYKAESLRGIKF.....LLVQFI.....DEQG.Q....P.L.....P.KY
   7 ...MKLAVVIGQIVCTVRHPGLEHDKL.....LLVETI.....NRQG.E....P.S.....G.EC
   8 ...MLIVKVIKPLVSTNRIPDFEHKHL.....QVVQ--.....--DG.S....T.K.....K.--
   9 ...MLICKVLKPLVSTNRIPGFEHKHL.....QVV---.....-LDG.S....S.N.....K.--
  10 ...MLICKVVKPLVSTNRIPGFEHRHL.....QVV---.....-LDG.S....S.K.....K.--
  11 ...MLIVKVIKPLVSTNRIPDFEHKHL.....QVVQ--.....--DG.S....T.K.....K.--
  12 ...MLIVKVIKPLVSTNRIPDFEHKHL.....QVVQ--.....--DG.S....A.K.....K.--
  13 ...MEIMQVMGRLVCTQRVEGLGHMHL.....RILR--.....----.N....N.K.....G.KQ
  14 ...MEIMQVMGRLVCTQRVEGLGHMNL.....RILR--.....----.N....N.K.....G.KQ
  15 ...MEIMQVMGTLVCTFRVAGLDHMHL.....RVL---.....---C.N....S.K.....G.KK
  16 ...MQIAKVRGTVVSTQKEPNLKGTKL.....LLLQFI.....DEEG.H....L.L.....P.KY
  17 ...MLIVKVVKPLVSTNRIPDFEHKHL.....QVV---.....-LDG.S....T.K.....K.--
  18 ...MLICKVLKPLVSTNRIPGFEHKHL.....QVV---.....-LDG.S....S.K.....K.--
  19 ...MQIAKVRGTVVSTYKTRSLTGTKF.....LLLQFM.....DAQG.Q....P.L.....P.NY
  20 ...MEIMQVKGTLVCTYRVAGLDHMHL.....RILQ--.....----.N....S.K.....G.KQ
  21 ...MQVAKVRGTVVSTQKDPSLRGVKL.....LLLQFV.....DEDG.N....I.L.....P.QY
  22 ...MRIMRVEKTLVSTNRIDGFGHRPL.....LVVQ--.....---D.K....P.G.....G.TR
  23 ...MRIAKVRGTVVSTYKEPSLQGVKF.....LVVQFL.....DEAG.Q....A.L.....Q.EY
  24 ...MLIVKVVKPLVSTNRIPDFEHKHL.....QVV---.....-LDG.S....T.K.....K.--
  25 ...MLICKVVKPLVSTNRIPGFEHKHL.....QVV---.....-LDG.S....S.S.....K.--
  26 eadMKLAVVTGQIVCTVRHQGLAHDKL.....LMVEMI.....DAQG.N....P.D.....G.QC
  27 eadMKLAVVTGQIVCTVRHQGLAHDKL.....LMVEMI.....DAQG.N....P.D.....G.QC
  28 eadMKLAVVTGQIVCTVRHQGLAHDKL.....LMVEMI.....DAQG.N....P.D.....G.QC
  29 ...MLICKVLKPLVSTNRIPGFEHKHL.....QVV---.....-LDG.S....S.K.....K.--
  30 ...MQIGRVRGTVVSSQKEPSMVGVKF.....LLLQLI.....DEAG.Q....P.L.....P.QY
  31 ...MEIMQVMGTLVCSYRVAGLDHMHL.....RILK--.....----.N....N.K.....G.KK
  32 ...MEIMQVMGRLVCTQRVDGLGHMHL.....RILR--.....----.N....N.A.....G.KQ
  33 ...MEIMQVMGTLVCSFRVAGLDHMHL.....RILR--.....----.N....A.K.....G.KK
  34 ...MQLAKVLGTVVSTSKTPNLTGVKL.....LLVQFL.....DTKG.Q....P.L.....E.RY
  35 ...MEIMKVLGRMVCTQRVAGLGHMNL.....RILE--.....----.N....N.K.....G.KK
  36 ...MRIMRVKTTLVSTNRIHAMGHRPL.....LVVQ--.....---D.T....P.G.....G.AR
  37 ...MKIMRVRTTLVSTNRIDAMGHRPL.....LVVQ--.....---E.T....P.N.....G.PR
  38 ...MKIMRVRTTLVSTNRIDAMGHRPL.....LVVQ--.....---E.T....P.N.....G.PR
  39 ...MKIARVCGTVTSTQKEDTLTGVKF.....LVLQYL.....GEDG.E....F.L.....P.DY
  40 ...MEIMQVMGRLVCTQRVEGLGHMHL.....RIL---.....---C.N....N.K.....G.KR
  41 ...MLICKVLKPLVSTNRIPEFEHKHL.....QVV---.....-LDG.S....S.Q.....K.--
  42 ...MRIAIVRGTVTSTQKDPSLTGVKF.....LLVQYV.....DLEG.Q....P.Q.....P.DY
  43 ...MRIAIVRGTVTSTQKDPSLTGVKF.....LVVQYV.....DLEG.R....P.Q.....P.DY
  44 ...MLICKVLKPLVSTNRIPGFEHKHL.....QVV---.....-LDG.T....S.R.....K.--
  45 ...MRIMRVEKTLVSTNRIDSFGHRPL.....LVVQ--.....---E.K....A.G.....G.TR
  46 ...MKIMQVEKTLVSTNRVREMGHRPL.....LVVR--.....---E.K....A.G.....G.TR
  47 ...MKIYKVDKTLVSTNRIAMMEHKPL.....LVVR--.....---E.K....D.G.....G.TP
  48 ...MKIFKVDKTLVSTSRISMMEHKPL.....LVVR--.....---E.K....D.G.....G.TP
  49 ...MKIMQVEKTLVSTNRVREMGHRPV.....LVVR--.....---E.K....A.G.....G.TR
  50 ...MEIMQVSDTLICTFRVAGLDHMHL.....RILV--.....----.N....N.K.....G.KK
  51 ...MKICQVEKTLVSTNRIKEMGHRPL.....LVVK--.....----.E....K.G.....G.AR
  52 ...MQIGKVTGSLWATRKDEKLNGLKL.....LLVEIC.....TDET.E....D.V.....R.HS
  53 ...MQIGKVTGSLWATRKDEKLNGLKL.....LLVEIC.....TDEV.E....D.K.....R.HS
  54 ...MKIMQVEKTLVSTNRIADMGHKPL.....LVV---.....--WE.K....P.G.....A.PR
  55 ...MEIMQVTGSLVCSQRVEGLLHWQL.....RILR--.....----.S....T.K.....G.KL
  56 ...MRVARVIGHVIATVRSQHMRMDKL.....CLVEFV.....DKNG.G....T.S.....G.DI
  57 ...MRLAKVIGQVVATVRSERLGMDKL.....ALIKFI.....DQDG.N....E.E.....S.SV
  58 ...MKICQVEGTLVATARIPGLLNRRL.....LVVK--.....-ERG.S....S.A.....K.Q-
  59 ...MQLAKVVGSVVSTQKSASLTGKKL.....MVVTLV.....NLDG.StplfQ.E.....N.TL
  60 ...MQLAKVVGSVVSTQKSASLTGKKL.....MVVTLV.....NLDG.StplfQ.E.....N.TQ
  61 ...MRIGRVINSIWATRKADSLIGTKL.....MIVQLL.....DRPH.G....E.L.....G.PI
  62 ...MRIGRVLNSIWATRKADSLIGTKL.....MIVQLL.....DRPH.G....E.L.....G.PI
  63 ...MIIGKVIGNVWATRKEDALNGLKL.....MVVQRE.....DACS.R....S.S.....H.ES
  64 ...MFMAKITGSVVSTKKEDSLTGKKL.....MIVQPI.....DANG.E....H.V.....R.SE
  65 ...MDILQVEAPLVCTRRVEGLKQTSL.....RVLR--.....----.D....S.Q.....G.RR
  66 ...MKICQVERPLVATNRIPGLEHKYL.....QVVR--.....--DG.S....-.-.....-.SM
  67 ...MFMAKITGSVVSTKKEDSLTGKKL.....MIVQPV.....DANG.E....H.V.....R.SE
  68 ...MDIMRVVSDLVATRRIPGLQNASL.....RVLT--.....----.D....A.K.....G.RI
  69 ...MIIGKVIGNVWATRKDETLNGLKL.....LVIESI.....DYGR.N....Q.R.....G.ES
  70 ...MQLARVVGSVVSTQKSPTLIGKKL.....LLVRRV.....AGDG.S....L.P.....P.DS
  71 ...MEVWRVVDELVCTRRVPGMSSASL.....RILK--.....----.G....Q.K.....G.EI
  72 ...MDIGKVVGNVWATRKDEKLCGQKL.....LVVKIL.....KTKD.T....Y.K.....E.GF
  73 ...MYLAKVTGALVSTTKHASLNGAKL.....LIVARL.....DEHY.R....P.T.....G.TA
  74 ...MEIGRVVGNVWATRKDEKLNGQKF.....LIVKLL.....VSKD.K....E.K.....E.GL
  75 ...MYLAKVTGALVSTTKHASLNGSKL.....LIVARL.....DENY.Q....P.T.....V.HA
  76 ...MQLARVVGSVVSTQKSPTLIGKKL.....LLVRRV.....AGDG.S....L.P.....P.DS
  77 ...MRIARVVGSAVSTVKDPSLVGHKL.....LLVQET.....DASS.A....V.T.....G.SV
  78 ...MIAAKVIDNIWATRKADSLRGLKF.....MLVEVL.....G--G.I....D.A.....G.RS
  79 ...MHLARVTGAVVSTQKSPSLIGKKL.....LLVRRI.....SADG.ElpltP.L.....T.GD
  80 ...MLLGKVIGNVVATRKDETLVGTKM.....LITLPV.....DLDG.N....P.A.....G.QP
  81 ...MHLARVTGAVVSTQKSPSLIGKKL.....LLVRRV.....SADG.ElpltP.L.....T.GD
  82 sdiMFMAKITGSVVSTKKEDSLTGKKL.....MIVQPV.....DANG.E....N.V.....R.SE
  83 ...MIAAKVIDNIWATRKADSLRGLKF.....MLVEVL.....G--G.I....D.K.....G.RL
  84 ...MQLARVVGSVVSTQKSPTLIGRKL.....LLVRRV.....AGDG.S....L.P.....P.DS
  85 sdvMFMAKITGSVVSTKKEDSLTGKKL.....MIVQPV.....DANG.E....H.V.....R.SE
  86 ...MFIAKVTGSVIATQKVESMVGNKL.....LVVEPY.....RLEP.Q....D.Rss6ttG.RT
  87 ttsMFLARVTGSVVCTQKVASMTGHKL.....LIVEPY.....RLDE.K....T.Rak6stG.RT
  88 m..MEVWRVVDELVCTRRVPEMGSASL.....RILK--.....----.G....Q.K.....G.DI
  89 ...MILARVVGTVVATRKDPRLEGKKL.....LILKPI.....SPDG.K....D.E.....S.GY
  90 ...MEIMRVMSDLVCTRRIPGLYSASL.....RVLA--.....----.D....Q.K.....G.VL
  91 ...MYFGRVVGSVWATIKSPQMVGQRM.....LVVQPL.....TPEL.K....N.T.....G.KP
  92 ...MILGKVVSSVWATRKETSLTGVKF.....MIVEILe10sdKIDR.R....K.K.....R.KV
  93 ...MYMAKVVGNVVATRKDDSLVGYKL.....MIVKRI.....DVKE.N....F.I.....G.NE
  94 ...MQLARVRGNVVASIKAAGLASHKL.....LLVEPVra7qdDADG.V....E.P.....S.ST
  95 ...MHLARVTGAVVSTQKSPSLIGKKL.....LLVRRV.....SADG.ElpasP.T.....S.GD
  96 ...MLIGEVIGNVWATKKYDGLDGLKF.....LIVK--.....----.T....E.D.....N.KR
  97 ...MHLARVTGAVVSTQKSPSLIGKKL.....LLVRRV.....SADG.ElpasP.T.....S.GD
  98 ...MQVWRVVDDLVCTRRVPGMSSASL.....RVLK--.....----.G....Q.K.....G.EI
  99 ...MYLGKVIGTVVSTSKSESLLGTKL.....LIVTRL.....SETL.A....V.I.....G.PV
 100 ...MLLGKVTGSLWSTRKDEKLNGWKF.....MMVDIL.....NQED.E....K.Q.....G.-F
 101 ...MEIWRVKDELVCTRRAPGLKSASL.....RVLQ--.....----.G....Q.T.....G.NI
 102 ...MEIMRVMSHLVCTRRIPGLYSASL.....RVLA--.....----.D....Q.K.....G.VL
 103 ...M--AKVVGSVVSTQKDRSLVGRKL.....MIVQPV.....NSDG.Q....S.V.....R.HE
 104 ...MILAYVLGNVWSTRKEEALKGFKF.....LVVQPVtlty.EESG.R....P.Rfeky.G.NT
 105 ...MELGRVKGQVVATIRDPRVPHASL.....LLVDLI.....NAEG.D....I.I.....R.YG
 106 ...MYLGKVIGTVVSTSKNESLSGTKL.....LVVARL.....TEKL.I....P.D.....G.ST
 107 ...---------MVCTQRVAGLGHMNL.....RILE--.....----.N....N.K.....G.KK
 108 rksMELARVRGQVVATIRDPKVPHTSL.....LLVDFI.....RADG.V....V.R.....R.EG
 109 ...MQILQVKKQLVLTSRLKDLGHLPL.....KAL---.....---S.S....E.T.....G.EI
 110 ...M--ARVVGSVVATQKDPSLVGKKL.....MIVQQI.....NSDQ.Q....P.V.....R.FE
 111 ...M--ARVVGSVVATQKDPSLVGKKL.....MIVQQI.....NSDQ.Q....P.V.....R.FE
 112 ...MNLAKVVGTATSTVKHPSMQGWKL.....LVVQPQ.....QADGvT....P.D.....G.HP
 113 ...MEVMRVRSDLIATRRIPGLKNISL.....RVME--.....----.D....A.T.....G.KV
 114 ...MEIHQVKQALVLTSRLEDLGHLPI.....KVLKSL.....S---.-....-.T.....G.AT
 115 m..MKIARVIGTVTLSRMHPSMKGYKL.....RCVEVVe10nqDDAK.P....I.G.....G.DT
 116 ...MIAATVTGNVWSTRRIEGIPAGAF.....LEVEV-.....--DG.S....-.-.....G.SR
 117 ...MLIGKLINNVWATKKAHALDGFKF.....MLAE--.....EIQG.S....N.K.....G.RR
 118 ...MQISRVVRDLVTTKRVFWLASKSL.....RVVE--.....----.D....P.A.....G.NL
 119 ...MISGTVVGQVWSTRRIDGIPAGAF.....LEVEV-.....--DG.S....-.-.....G.SR
 120 ...MQPARVIGHTRATVKHESLQGRRL.....VLVQPT.....GVGE.K....P.D.....G.AP
 121 ...MIRGTVIGQVWSTRRIDGIPAGAF.....LEVEV-.....--DG.S....-.-.....G.SR
 122 ...MRIAEIVGKVTLSRVHPSLQGAQLklavpLMLEDL.....RGET.D....L.L.....EaEF
 123 ...MILAKVTGHVVATQKCDELRGSNL.....LLITQL.....DDNQ.Q....LmK.....D.RS


                   50          60            70              80        
                   |           |             |               |        
   1 ....AVAID.NIGAGTGEWVLLV.S.G.SSARQAH.KS..E.T....SPV.DLCVIGIVDE.VVS
   2 ....AVAID.NIGAGTGEWVLLV.S.G.SSARQAH.KS..E.T....SPV.DLCVIGIVDE.VVS
   3 ....AVAID.NIGAGTGEWVLLV.S.G.SSARQAH.KS..E.T....SPV.DLCVIGIVDE.VVS
   4 ....AVAID.SIGAGTGEWVLLV.S.G.SSARQAH.RS..E.L....SPV.DLCVIGIVDE.VVA
   5 ....EVAADnSVGAGFDEWVLIS.R.G.SAARQLL.GN..E.Q....RPV.DAAVVAIIDT.IHV
   6 ....EVAGD.LVGAGVNEWVLVS.R.G.GAARTET.GM..E.G....RPL.DAMVIGIIDT.VNV
   7 ....SVATD.SIGAGNGEWVLVV.G.G.SSARRAQ.HS..E.A....SPV.DLSIIGIVDE.VVM
   8 ....-VAVD.AVGAKPGDWVICV.S.S.SAAREAA.GS..K.S....YPS.DLTIVGIIDH.WEP
   9 ....-VAVD.AVGCKPGDWVICV.G.S.SAAREAA.GS..K.S....YPS.DLTIVGIIDH.WDP
  10 ....-VAVD.AVGCKPDDWVICV.G.S.SAAREAA.GS..K.S....YPS.DLTIVGIIDH.WDP
  11 ....-VAVD.AVGAKPGDWVICV.S.S.SAAREAA.GS..K.S....YPS.DLTIVGIIDH.WEP
  12 ....-VAVD.AVGAKPGDWVICV.S.S.SAAREAA.GS..K.S....YPS.DLTIVGIIDH.WEP
  13 ....LVAVD.PVGAREGNWVFTA.S.G.SAARFAC.PE..P.S....TQT.DLTIGGIIDF.WTP
  14 ....FVAVD.PVGAREGNWVFTA.S.G.SAARFAC.PN..P.A....TQT.DLTIGGIIDF.WSP
  15 ....LVAVD.PVGAREGNWVFTA.S.G.SAARHAC.PD..N.T....VLT.DLTIGGIIDH.WNP
  16 ....EVAAD.NVGAGINEWVLVS.R.G.GAAREIP.GS..E.K....LPV.DARVVAIIDT.ITV
  17 ....-VAVD.AVGAKPGDWVICV.S.S.SAAREAA.GS..K.S....YPS.DLTIVGIIDH.WEP
  18 ....-VAVD.AVGCKPDDWVICV.G.S.SAAREAA.GS..K.S....YPS.DLTIVGIIDH.WDP
  19 ....EVAGD.LVGAGINEWVLVS.R.G.SAARVDD.GM..E.H....RPL.DALVVGIIDT.VTV
  20 ....LVAVD.PVGAREGNWVFTA.S.G.SAARHAC.PD..N.K....VLT.DLTIGGIIDH.WMP
  21 ....EVAAD.SVGAGVDEWVLVS.R.G.SVARQVI.GN..E.Q....RPL.DAVVVAIIDT.IYV
  22 ....SVAVD.AVGCIPGDWVICV.G.S.SAARDAA.GA..K.D....FPS.DLTIVGIIDH.WNP
  23 ....EVAAD.MVGAGVDEWVLIS.R.G.SQARHVR.DC..Q.E....RPV.DAAVIAIIDT.VNV
  24 ....-VAVD.AVGAKPGDWVICV.S.S.SAAREAA.GS..K.S....YPS.DLTIVGIIDH.WEP
  25 ....-VAVD.AVGCKPGDWVICV.G.S.SAAREAA.GS..K.S....YPS.DLTIVGIIDH.WDT
  26 ....AVAID.SIGAGTGEWVLLV.S.G.SSARQAH.RS..E.L....SPV.DLCVIGIVDE.VVA
  27 ....AVAID.SIGAGTGEWVLLV.S.G.SSARQAH.RS..E.L....SPV.DLCVIGIVDE.VVA
  28 ....AVAID.SIGAGTGEWVLLV.S.G.SSARQAH.RS..E.L....SPV.DLCVIGIVDE.VVA
  29 ....-VAVD.AVGCKPDDWVICV.G.S.SAAREAA.GS..K.S....YPS.DLTIVGIIDH.WDP
  30 ....EVAAD.GVGAGLDEWVLFS.R.G.SAARQVA.GS..E.K....RPV.DAVVIGIIDT.VSV
  31 ....LVAVD.PVGAREGNWVFTA.S.G.SAARHAC.PD..N.T....VLT.DLTIGGIIDF.WNP
  32 ....LVAVD.PVGAREGNWVFTA.S.G.SAARFAC.PD..P.N....TQT.DLTIGGIIDY.WLP
  33 ....LVAVD.PVGAREGNWVFTA.S.G.SAARHAC.PD..N.K....VLT.DLTIGGIIDH.WNP
  34 ....EVAGD.VVGAGLNEWVLVA.R.G.SAARKER.GN..G.D....RPL.DAMVVGIIDT.VNV
  35 ....LVAVD.PVGAREGNWVFTA.S.G.SAARFAC.PN..P.E....VQT.DLTIGGIIDY.WES
  36 ....SVAVD.AVGCIPGDWVICV.G.S.SAARDAA.GA..R.D....YPS.DLTIVGIIDH.WNP
  37 ....SVAVD.AVGCIPGDWVICV.G.S.SAARDAA.GA..K.D....YPS.DLTIVGIIDH.WNP
  38 ....SVAVD.AVGCIPGDWVICV.G.S.SAARDAA.GA..K.D....YPS.DLTIVGIIDH.WNP
  39 ....EVAAD.TVGAGQDEWVLVS.R.G.SAARHII.NG..T.D....KPI.DAAVVAIIDT.VSR
  40 ....LVAVD.PVGAREGNWVFTA.T.G.TAARWGC.PD..P.N....VQT.DLTIGGIIDH.WNP
  41 ....-VAVD.AVGCIPGDWVICV.G.S.SAAREAA.GS..K.S....YPS.DLTIVGIIDH.WDP
  42 ....AVAAD.PVGAGIDEWVLVS.Q.G.SAARQPQ.GN..Q.T....RPL.DAVVMAIIDT.VSV
  43 ....AVAAD.PVGAGAEEWVLVS.Q.G.SAARQPQ.GN..E.T....RPL.DAVVMAIIDT.VSI
  44 ....-VAVD.AVGCKPDDWVICV.G.S.SAAREAA.GS..K.S....YPS.DLTIVGIIDH.WEP
  45 ....SVAVD.AVGCVPGDWVICV.G.S.SAARDAA.GA..K.D....FPS.DLTIVGIIDH.WTA
  46 ....SVAVD.AVGCIPGDWVICV.G.S.SAAREAA.GA..K.D....FPS.DLTIIGIIDH.WQE
  47 ....QVAVD.PVGCKPGDWVICC.G.S.SAARDAT.GV..K.G....YPS.DLTIVGIIDK.WEV
  48 ....QVAVD.PIGCKPGDWVLCV.G.S.SAARDAV.GI..K.G....YPS.DLTIVGIIDK.WEM
  49 ....SVAVD.AVGCIPGEWVICV.G.S.SAAREAA.GA..K.D....FPS.DLTIIGIIDH.WQE
  50 ....LVAVD.PVGARKGNWVFTA.S.G.SAARHAC.PD..N.T....VLT.DLTIGGIIDH.WTP
  51 ....SIAVD.AVGCVSGDWVICV.G.S.SAAREAA.GS..K.D....FPS.DLTIVGIIDH.WSE
  52 ....IVAAD.NAGAGNGDLVLVT.T.G.SAARAST.GD..N.T....IPV.DACIVGIIDS.VER
  53 ....IVAAD.NAGAGNGDLVLVT.T.G.SAARAST.GD..N.T....IPV.DACIVGIIDS.VER
  54 ....QVAVD.AIGCIPGDWVLCV.G.S.SAAREAA.GS..K.S....YPS.DLTIIGIIDQ.WNG
  55 ....MVAVD.PVGASPGNWVFTA.S.G.SAARFAT.GI..P.D....TQT.DLTIAGIIDL.WDP
  56 ....HIAMD.QLGAGEGEWVMVV.S.G.SSARAAY.GSveN.D....SPV.DLCVVGIIDE.VTA
  57 ....MVAAD.RLGAGEGEWVLVV.S.G.SSARMSVdGT..G.Q....TPV.DLSIVGIIDE.VTG
  58 ....-VAVD.PVGCKPGDWVIAV.G.S.SAARDAA.GS..K.D....FPS.DLTIVGIIDY.WDD
  59 ....EVAVD.SMGAGEGELVLVS.R.G.SSARKIF.PE..P.N....QAI.DLAIVGIVDT.IDR
  60 ....EVAVD.SMGAGEGELVLVS.R.G.SSARKIF.PE..P.N....QAI.DLAIVGIVDT.IDR
  61 ....IVAAD.IIGAGIGEKVLVT.E.G.SSARNMD.NF..N.D....SPI.DSTIVGIIDE.-EK
  62 ....IVAAD.IIGAGIGEKVLVT.E.G.SSARNMD.NF..N.D....SPI.DSTIVGIIDE.-EK
  63 ....FVAVD.CVGAGTDERVLVV.T.G.SSARKAL.GN..P.D....APV.DAAIVGIIDE.VKI
  64 ....EVACD.SVGAGIGEYVLVA.R.G.NAARSVF.AE..P.N....SAI.DSAIIAIVDS.FDK
  65 ....HVAVD.PVGAREGNWVFTV.S.G.SAARYAS.GD..F.G....ILT.DLTIGGIIDH.WEA
  66 ....LVAVD.GVGCIPGDWVICV.G.S.SAAREAA.GS..K.E....YPS.DLTIVGIIDH.WPP
  67 ....EVACD.SVGAGIGEYVLVA.R.G.NAARSVF.AE..P.N....SAI.DSAIIAIVDS.FDK
  68 ....SVAAD.PVGVPPGKWVIAV.S.G.SAARYAA.GD..Y.R....ILT.DLTIAGIIDH.WDP
  69 ....FVAVD.GVGAGIGERVLVV.K.G.NAARKAL.QK..E.G....AAV.DATIVGIIDE.VEV
  70 ktpdEVAVD.SVGAGQGELVLLA.G.G.SSARRVF.AE..P.N....DAI.DLAIVAIVDE.CSY
  71 ....SVATD.PVGAPPGKWVFTA.A.G.TAARMAM.PD..R.T....VAT.DLTICGIIDG.WEE
  72 ....MVAAD.NAGAGNGDLVLIS.K.G.SSARESI.EK..S.H....VPV.DATIVGVVDS.FEV
  73 ....QVAVD.FVGAGNGETVIVT.T.G.SSARMST.SK..E.H....SVI.DAAVVGIVDS.LDF
  74 ....FVAAD.NAGAGIGDIVLIT.K.G.GAARQSI.GN..R.E....VPI.DAAIVGIVDS.IDI
  75 ....QVAVD.TVGAGNGEIVIIT.T.G.SSARMSN.NK..D.H....SVI.DAAVVGIVDS.LEL
  76 ktpdEVAVD.SVGAGQGELVLLS.G.G.SSARRVF.AE..P.N....DAI.DLAIVAIVDE.CSY
  77 ....FVAID.VVGAGSGELVLVS.E.G.SAARHSA.TT..T.G....QPV.DAVIMGILDS.LEV
  78 ....MIAAD.TIGAGIGERVLVC.T.G.SSARKML.DR..D.D....VPI.DAVIVGIIDEdCT-
  79 ....EVAVD.SVGAGVGELVLLS.S.G.SSARHVF.SG..P.N....EAI.DLAVVGIVDT.LSR
  80 ....FVAVD.TVGAGVGELVLYV.T.G.SVAPFAV.RR..G.E....VPI.DAAIIGIVDK.LEW
  81 ....EVAVD.SVGAGVGELVLLS.S.G.SSARHVF.SG..P.N....EAI.DLAVVGIVDT.LSR
  82 ....EVACD.SVGAGIGEYVLVA.R.G.NAARSVF.AE..P.N....SAI.DSAIIAIVDS.FDK
  83 ....IIAAD.TISAGIGERVLVC.T.G.SSARKML.GQ..D.D....IPI.DAVIVGIIDEdCT-
  84 ktpdEVAVD.SVGAGQGDLVLLS.G.G.SSARRVF.SE..P.N....DAI.DLAIVAIVDE.CSY
  85 ....EVACD.SVGAGIGEYVLVA.R.G.NAARSVF.AE..P.N....SAI.DSAIIAIVDS.FDK
  86 ....FIAVD.MLGAGVGDYVLIT.Q.G.SSARLTP.ET..K.H....LPI.DCVVVGIVDQ.AHI
  87 ....FIAVD.TLGAGEGELVLVC.Q.G.SSARLTP.ET..K.T....LPI.DAVVIGLVDS.VHV
  88 ....SVATD.PVGAPPGKWVFTA.A.G.TAARMAM.PD..R.T....VAT.DLAICGIIDG.WEE
  89 ....VVSVD.TVSAGFRERVIAV.S.G.SSARMAE.GC..K.D....TPV.DNAIIGIVDE.VHM
  90 ....AVAVD.PVGVPEGKWVFTA.G.G.SAARYGA.GD..Y.R....ILT.DLTILGIIDQ.WDV
  91 ....LICTD.SIGAGAGELVYWV.R.G.KEASFPF.SP..Q.E....PPI.DTTVVGIVDE.VHV
  92 ....VVAAD.LVGAGIGEKVLVS.R.G.SSARQIE.GL..Q.E....TPV.DMAIIGIIDE.ER-
  93 ....EVAAD.YVGAGIGDYVLLC.K.G.SAVR--V.EK..Q.K....VAI.DMAIIGIIDT.IDV
  94 ....YVAID.LAGAGVGEIVLVT.L.G.SAARVDS.DG..H.N....APT.DAAVIAIVDS.VQF
  95 ....EVAVD.SVGAGVGELVLLS.G.G.SSARHVF.SG..P.N....EAI.DLAVVGIVDT.LSR
  96 ....MVAFD.SVGAGIGEKVIIS.T.G.SSARNAL.NM..R.D....VPV.DAAIIGIIDG.MDE
  97 ....EVAVD.SVGAGVGELVLLS.G.G.SSARHVF.SG..P.N....EAI.DLAVVGIVDT.LSC
  98 ....SVATD.PVGVPPGKWVFTA.A.G.TAARMAM.PD..R.T....VVT.DLTICGIIDG.WEE
  99 ....AIAVD.TVGAGNGEIVIVT.C.G.SAARRTA.GK..E.Q....SVI.DAAIVGIVDT.VEV
 100 ....LIAAD.NAGAGVGDKVLIS.Q.G.NAARISA.ED..P.N....VPI.DAMIVGVIDS.TAE
 101 ....QVATD.PVGAPVGKWVFTT.L.G.SAARLAM.PD..P.S....VTT.DLTICGIIEG.WEE
 102 ....AVAVD.PVGVPEGKWVFTA.G.G.SAARYGA.GD..Y.R....ILT.DLTILGIID-.---
 103 ....EVAAD.SVGAGIGEYVLLV.R.G.AGARRAT.SE..DiS....KDVnDCSIVGIIDR.FDK
 104 ....LIAAD.RIGAGETEIVMIA.S.G.SSARQSL.ED..Q.R....API.DAVVIGIIDK.ETF
 105 ....QVTVD.TLGAGEGEYVLLVrG.G.GAAPRTA.TG..E.R....SPV.DLNVIAIVDQ.ITA
 106 ....QVVVD.TVGAGNGEIVIVS.C.G.SSARQST.GK..D.H....SVI.DAAVVGIVDT.VET
 107 ....VVAVD.PVGAREGNWVFTA.S.G.SAARFAC.PN..P.E....VQT.DLTIGGIIDY.WES
 108 ....HVAAD.TLGAGEGEYVLLV.R.G.SGAALVV.GG..G.K....PPI.DLSVVAIVDQ.ISA
 109 ....FVAMD.PVGTKDGDWVFTI.A.N.SAARDAA.GD..K.R....LLT.DLTVGGIIDD.WQP
 110 ....QVAAD.TVNAGIGDNVLIV.R.G.AGARRAD.KE..R.DedqtRDVnDCTIVGIIDR.FDK
 111 ....QVAAD.TVNAGIGDNVLIV.R.G.AGARRAD.KE..R.DedqvRDVnDCTIVGIIDR.FDK
 112 ....LLAID.AVGAGPGETVMIT.SdG.ETTRELL.GF..P.K....TPV.RWTVIGIADE.---
 113 ....SVACD.PIGVPEGCWVFTI.S.G.SAARFGV.GD..F.E....ILT.DLTIGGIIDH.WVT
 114 ....LVAMD.PIDVKPGDWVFTI.A.N.SAARDAA.GD..K.R....LLT.DLTVGGIIDD.WQP
 115 ....IVAWD.LVGSRNGDWVALA.E.G.PESAAPF.RP..E.V....KPT.DASIVAILDH.CEV
 116 ....MIAFD.VLGTGLGERVLIA.Q.G.SVAANWF.TG..T.P....PPV.DALIIGSIDD.PSS
 117 ....FIVVD.IVGAGIGDVVIVC.T.G.SGARKML.CN..D.E....LPV.DAAVVGIVDEdCN-
 118 ....DVVVD.PIGTKPGDYVITI.G.Y.SAARAAA.GN..P.N....ITT.DLTIGGIIDD.WSE
 119 ....LVAFD.VLGSGVGEHVLVT.Q.G.SVAASWF.TG..T.P....PPV.DALIIGSIDP.TG-
 120 ....LLVLD.ELGCRVGDRVMLT.S.EtGPIREMT.GF..E.T....CPA.RWSVQGLIDE.PAK
 121 ....LIAFD.VLGSGVGEHVLVT.Q.G.SVAASWF.TG..T.P....PPV.DALIIGSIDP.TG-
 122 ....LVVYD.SFSAGVGERIALS.E.G.GEAAQPF.YP..E.L....KPV.DAYNAAILDT.VHL
 123 ....WVAVD.SVGAGVHDVVLAE.E.-.---YFAL.NK..D.R....YKA.-MSVVAIVEK.VFR


         90           
         |           
   1 .G.GQVIFH...K...
   2 .G.GQVIFH...K...
   3 .G.GQVIFH...K...
   4 .G.GKVVFH...K...
   5 .E.DRLIYS...Kkdq
   6 .D.NRSLYS...Kkda
   7 .E.SQVIFH...K...
   8 .D.PPKPPA...Apap
   9 .D.SPKQIE...V...
  10 .D.SPVPMP...Eerk
  11 .D.PPKSPT...Papa
  12 .D.PPKTPA...Papa
  13 .D.G-----...-...
  14 .D.G-----...-...
  15 .D.G-----...-...
  16 .D.NRMIYG...Kkde
  17 .D.PPKTAS...Psps
  18 .E.TQQQISggaK...
  19 .E.NSRLYS...Kkde
  20 .D.G-----...-...
  21 .E.DRMIYS...Kkdq
  22 .E.AI----...-...
  23 .E.NRSVYD...Kreh
  24 .D.PPKTSA...Psps
  25 .E.KA----...-...
  26 .G.GKVVFH...K...
  27 .G.GKVVFH...K...
  28 .G.GKVVFH...K...
  29 .G.APKPVS...Ggsa
  30 .D.NRPLYS...Kkdq
  31 .D.G-----...-...
  32 .D.G-----...-...
  33 .D.G-----...-...
  34 .A.SGSLYN...Krdd
  35 .D.------...-...
  36 .E.GA----...-...
  37 .E.VS----...-...
  38 .E.VA----...-...
  39 .D.NYLLYS...Krtq
  40 .D.D-----...-...
  41 .D.AGKPNP...Ppna
  42 .G.GRSLYN...Krdq
  43 .G.GRSLYN...Krdq
  44 .T.AG----...-...
  45 .E.G-----...-...
  46 .Q.H-----...-...
  47 .P.QDADTT...S...
  48 .P.EDGNSS...S...
  49 .Q.H-----...-...
  50 .D.G-----...-...
  51 .D.------...-...
  52 .Y.G-----...-...
  53 .Y.G-----...-...
  54 .E.------...-...
  55 .D.G-----...-...
  56 .A.SKQLYS...Krg.
  57 .G.TETWFK...Kyqr
  58 .P.AGRAAQ...Kvva
  59 .F.------...-...
  60 .F.------...-...
  61 .D.KLAEVS...Kha.
  62 .D.KLAEVS...Kha.
  63 .R.PES---...-...
  64 .-.------...-...
  65 .D.LQPATA...Kqcg
  66 .E.EAQS--...-...
  67 .-.------...-...
  68 .S.GSQTGN...-...
  69 .T.LQ----...-...
  70 .-.------...-...
  71 .E.------...-...
  72 .F.DE----...-...
  73 .N.GQ----...-...
  74 .E.ED----...-...
  75 .N.G-----...-...
  76 .-.------...-...
  77 .D.GAVTFR...Ks..
  78 .-.------...-...
  79 .-.------...-...
  80 .Q.RS----...-...
  81 .-.------...-...
  82 .-.------...-...
  83 .-.------...-...
  84 .-.------...-...
  85 .-.------...-...
  86 .D.HACVYS...Reet
  87 .DaKEVKVS...T...
  88 .E.G-----...-...
  89 .D.------...-...
  90 vD.GHHEAT...Kavs
  91 .K.RPVQVL...Apap
  92 .-.------...-...
  93 .-.------...-...
  94 .D.GETTFQ...Kr..
  95 .-.------...-...
  96 .E.------...-...
  97 .-.------...-...
  98 .E.------...-...
  99 .S.------...-...
 100 .-.------...-...
 101 .-.------...-...
 102 .-.------...-...
 103 .-.------...-...
 104 .Q.G-----...-...
 105 .S.GGKLYA...K...
 106 .V.N-----...-...
 107 .N.------...-...
 108 .L.NEVIYS...K...
 109 .K.QK----...-...
 110 .-.------...-...
 111 .-.------...-...
 112 .-.------...-...
 113 .-.------...-...
 114 .E.------...-...
 115 .Q.TS----...-...
 116 .-.------...-...
 117 .-.------...-...
 118 .E.RWRA--...-...
 119 .-.------...-...
 120 .K.KKNK-K...K...
 121 .-.------...-...
 122 .R.DQ----...-...
 123 .D.A-----...-...