Best Alignments for T0304

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1gulA/T0304-1gulA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1gulA/T0304-1gulA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.2100e-016.30e-06 1pgtA a.45.1.1
c.47.1.5
1z8yB/T0304-1z8yB-t04-global-adpstyle1.a2m 1z8yB/T0304-1z8yB-t04-global-adpstyle1.al 1.4303e+011.84e-03
1rybA/T0304-1rybA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1rybA/T0304-1rybA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5770e+011.45e+01 c.56.3.1
1ld4M/T0304-1ld4M-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ld4M/T0304-1ld4M-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6000e+011.05e+04 i.6.1.1
1h9sB/T0304-1h9sB-t04-global-adpstyle1.a2m 1h9sB/T0304-1h9sB-t04-global-adpstyle1.al 1.6905e+014.15e-04 b.40.6.2
b.40.6.2
1rw2A/T0304-1rw2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1rw2A/T0304-1rw2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9139e+011.70e-04 a.118.19.1
1b9bA/T0304-1b9bA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1b9bA/T0304-1b9bA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0600e+011.08e+04 1amk c.1.1.1
2cigA/T0304-2cigA-t04-global-adpstyle1.a2m 2cigA/T0304-2cigA-t04-global-adpstyle1.al 2.3287e+017.37e-02
1womA/T0304-1womA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1womA/T0304-1womA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.5394e+015.83e+01
2gaiA/T0304-2gaiA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gaiA/T0304-2gaiA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.5643e+011.93e-03

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001