Best Alignments for T0303

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2ah5A/T0303-2ah5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ah5A/T0303-2ah5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2444e-253.39e-104
1te2A/T0303-1te2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1te2A/T0303-1te2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6729e-249.32e-102 c.108.1.6
1zrn/T0303-1zrn-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zrn/T0303-1zrn-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.5419e-244.39e-98 1qq5A c.108.1.1
2fdrA/T0303-2fdrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fdrA/T0303-2fdrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3145e-236.40e-95
2gfhA/T0303-2gfhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gfhA/T0303-2gfhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.5863e-234.26e-98
1x42A/T0303-1x42A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1x42A/T0303-1x42A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.8688e-234.99e-91
1l7mA/T0303-1l7mA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1l7mA/T0303-1l7mA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.4352e-212.71e-75 c.108.1.4
1swvA/T0303-1swvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1swvA/T0303-1swvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.7899e-214.26e-89
1rdfA/T0303-1rdfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1rdfA/T0303-1rdfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.5405e-203.16e-82 c.108.1.3
2go7A/T0303-2go7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2go7A/T0303-2go7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.0923e-209.74e-98

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001