Best Alignments for T0303

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2ah5A/T0303-2ah5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ah5A/T0303-2ah5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.0818e-234.29e-104
1te2A/T0303-1te2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1te2A/T0303-1te2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1398e-213.26e-106 c.108.1.6
2fdrA/T0303-2fdrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fdrA/T0303-2fdrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1349e-216.18e-98
2gfhA/T0303-2gfhA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gfhA/T0303-2gfhA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.8378e-217.09e-101
1jud/T0303-1jud-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jud/T0303-1jud-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.9000e-213.40e-94 1qq5A c.108.1.1
1swvA/T0303-1swvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1swvA/T0303-1swvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.5105e-201.92e-91
1rqlA/T0303-1rqlA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1rqlA/T0303-1rqlA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.3201e-205.81e-97 c.108.1.3
1x42A/T0303-1x42A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1x42A/T0303-1x42A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0231e-191.94e-94
2fi1A/T0303-2fi1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fi1A/T0303-2fi1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.1091e-184.55e-87
2go7A/T0303-2go7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2go7A/T0303-2go7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.1939e-187.64e-99

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001