Best Alignments for T0303

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2ah5A/T0303-2ah5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ah5A/T0303-2ah5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.6312e-046.26e-19
1o08A/T0303-1o08A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1o08A/T0303-1o08A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5537e-017.47e-19 c.108.1.6
2go7A/T0303-2go7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2go7A/T0303-2go7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.5459e-012.56e-12
2fnaA/T0303-2fnaA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fnaA/T0303-2fnaA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.8071e-012.20e-08
1pgtA/T0303-1pgtA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1pgtA/T0303-1pgtA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.0250e+008.23e-08 1pgtA a.45.1.1
c.47.1.5
1t5oA/T0303-1t5oA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1t5oA/T0303-1t5oA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.3988e+002.58e-05 c.124.1.5
1eexA/T0303-1eexA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1eexA/T0303-1eexA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.6284e+002.93e-07 1dioA c.1.19.3
1zkrA/T0303-1zkrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zkrA/T0303-1zkrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.6842e+007.40e-08
2f2eA/T0303-2f2eA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f2eA/T0303-2f2eA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.0946e+003.60e-03
1sf8A/T0303-1sf8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1sf8A/T0303-1sf8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.1540e+002.08e-06 d.271.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001