Best Alignments for T0303

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2ah5A/T0303-2ah5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ah5A/T0303-2ah5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.5059e-047.71e-16
2go7A/T0303-2go7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2go7A/T0303-2go7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.8446e-017.65e-11
1t5oA/T0303-1t5oA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1t5oA/T0303-1t5oA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.3149e-012.58e-05 c.124.1.5
1o08A/T0303-1o08A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1o08A/T0303-1o08A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.0732e-018.42e-14 c.108.1.6
1eexA/T0303-1eexA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1eexA/T0303-1eexA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1470e+002.93e-07 1dioA c.1.19.3
1sf8A/T0303-1sf8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1sf8A/T0303-1sf8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3660e+001.56e-04 d.271.1.1
1pgtA/T0303-1pgtA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1pgtA/T0303-1pgtA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.1339e+008.23e-08 1pgtA a.45.1.1
c.47.1.5
2fnaA/T0303-2fnaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fnaA/T0303-2fnaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.6335e+004.41e-07
1pu6A/T0303-1pu6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1pu6A/T0303-1pu6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.0839e+001.57e-03 a.96.1.5
1q6aA/T0303-1q6aA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1q6aA/T0303-1q6aA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.8962e+001.67e-09 a.186.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001