Best Alignments for T0303

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2ah5A/T0303-2ah5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ah5A/T0303-2ah5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0497e-041.28e-18
1o08A/T0303-1o08A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1o08A/T0303-1o08A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1958e-012.67e-18 c.108.1.6
2fnaA/T0303-2fnaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fnaA/T0303-2fnaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.8492e-011.50e-07
2f2eA/T0303-2f2eA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f2eA/T0303-2f2eA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1691e+003.60e-03
2go7A/T0303-2go7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2go7A/T0303-2go7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3553e+002.20e-11
1h97A/T0303-1h97A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1h97A/T0303-1h97A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4266e+001.20e-04 1h97A a.1.1.2
1zkrA/T0303-1zkrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zkrA/T0303-1zkrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.7552e+001.55e-06
1lbkA/T0303-1lbkA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1lbkA/T0303-1lbkA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.4140e+003.64e-06 a.45.1.1
c.47.1.5
1puoA/T0303-1puoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1puoA/T0303-1puoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.0378e+003.82e-08 a.101.1.1
a.101.1.1
1pu6A/T0303-1pu6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1pu6A/T0303-1pu6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.4955e+009.04e-03 a.96.1.5

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001