Best Alignments for T0302

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1agrE/T0302-1agrE-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1agrE/T0302-1agrE-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.4133e-242.77e-76 1agrE a.91.1.1
2bt2A/T0302-2bt2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bt2A/T0302-2bt2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0965e-222.41e-72
2a72A/T0302-2a72A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2a72A/T0302-2a72A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.9318e-216.24e-56
1omwA/T0302-1omwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1omwA/T0302-1omwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.5526e-082.19e-31 a.91.1.1
b.55.1.1
d.144.1.7
2af0A/T0302-2af0A-t2k-global-adpstyle1.a2m 2af0A/T0302-2af0A-t2k-global-adpstyle1.al 6.6573e-086.20e-48
2bv1A/T0302-2bv1A-t2k-global-adpstyle1.a2m 2bv1A/T0302-2bv1A-t2k-global-adpstyle1.al 8.7951e-082.52e-46
2crpA/T0302-2crpA-t2k-global-adpstyle1.a2m 2crpA/T0302-2crpA-t2k-global-adpstyle1.al 9.3572e-086.07e-47
1zv4X/T0302-1zv4X-t2k-local-adpstyle1.a2m 1zv4X/T0302-1zv4X-t2k-local-adpstyle1.al 1.5360e-077.40e-43
1htjF/T0302-1htjF-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1htjF/T0302-1htjF-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3939e-071.02e-23 1htjF a.91.1.1
2es0A/T0302-2es0A-t2k-global-adpstyle1.a2m 2es0A/T0302-2es0A-t2k-global-adpstyle1.al 3.5919e-074.09e-45

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001