Best Alignments for T0302

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1fqiA/T0302-1fqiA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1fqiA/T0302-1fqiA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3479e-211.64e-73 1agrE a.91.1.1
1eca/T0302-1eca-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1eca/T0302-1eca-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7040e+001.15e-08 1flp a.1.1.2
1r89A/T0302-1r89A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1r89A/T0302-1r89A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7385e+009.51e-11 a.160.1.3
d.218.1.7
d.58.16.2
2bt2A/T0302-2bt2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bt2A/T0302-2bt2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3183e+002.52e-72
2af0A/T0302-2af0A-t06-global-adpstyle1.a2m 2af0A/T0302-2af0A-t06-global-adpstyle1.al 2.5594e+001.60e-48
2a72A/T0302-2a72A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2a72A/T0302-2a72A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.5925e+004.15e-54
1ngnA/T0302-1ngnA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ngnA/T0302-1ngnA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.7795e+008.72e-08 a.96.1.2
2crpA/T0302-2crpA-t06-global-adpstyle1.a2m 2crpA/T0302-2crpA-t06-global-adpstyle1.al 2.8234e+002.04e-48
2bv1A/T0302-2bv1A-t06-global-adpstyle1.a2m 2bv1A/T0302-2bv1A-t06-global-adpstyle1.al 2.8376e+007.09e-47
1zv4X/T0302-1zv4X-t06-global-adpstyle1.a2m 1zv4X/T0302-1zv4X-t06-global-adpstyle1.al 3.1238e+002.27e-42

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001