Best Alignments for T0301

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2gkeA/T0301-2gkeA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gkeA/T0301-2gkeA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4901e-067.21e-45
1gqzA/T0301-1gqzA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1gqzA/T0301-1gqzA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.9547e-061.51e-44 d.21.1.1
d.21.1.1
1sdjA/T0301-1sdjA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1sdjA/T0301-1sdjA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.5256e-021.55e-29 d.21.1.2
d.21.1.2
1xubA/T0301-1xubA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xubA/T0301-1xubA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.5750e-028.07e-32
1oe4A/T0301-1oe4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1oe4A/T0301-1oe4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.6427e+005.55e-07 c.18.1.3
1sr8A/T0301-1sr8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1sr8A/T0301-1sr8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0690e+011.97e-12 e.54.1.1
1hzdA/T0301-1hzdA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1hzdA/T0301-1hzdA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7777e+013.84e-07 c.14.1.3
1ejxC/T0301-1ejxC-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ejxC/T0301-1ejxC-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.8850e+011.26e-09 b.92.1.1
c.1.9.2

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001