Best Alignments for T0301

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2gkeA/T0301-2gkeA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gkeA/T0301-2gkeA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3893e-022.87e-25
1xubA/T0301-1xubA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xubA/T0301-1xubA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4171e-022.67e-26
1w61A/T0301-1w61A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1w61A/T0301-1w61A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4848e-028.15e-28
1gqzA/T0301-1gqzA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1gqzA/T0301-1gqzA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7781e-021.67e-26 d.21.1.1
d.21.1.1
1ym5A/T0301-1ym5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ym5A/T0301-1ym5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7558e-014.17e-24
2azpA/T0301-2azpA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2azpA/T0301-2azpA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6898e+002.68e-23
2b3nA/T0301-2b3nA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2b3nA/T0301-2b3nA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1579e+002.41e-01
1oe4A/T0301-1oe4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1oe4A/T0301-1oe4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.6518e+001.79e-05 c.18.1.3
1sr8A/T0301-1sr8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1sr8A/T0301-1sr8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.0243e+004.41e-06 e.54.1.1
1dkmA/T0301-1dkmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dkmA/T0301-1dkmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.2656e+001.69e-08 1dklA c.60.1.2

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001