Best Alignments for T0300

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1debA/T0300-1debA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1debA/T0300-1debA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2573e+002.29e-02 1debA h.1.18.1
1jeqA/T0300-1jeqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jeqA/T0300-1jeqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3288e+017.21e-02 1jeqA a.140.2.1
b.131.1.1
c.62.1.3
1jkw/T0300-1jkw-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jkw/T0300-1jkw-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3590e+011.79e-05 1jkw a.74.1.1
a.74.1.1
2a6cA/T0300-2a6cA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2a6cA/T0300-2a6cA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6129e+012.89e-05
1sesA/T0300-1sesA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1sesA/T0300-1sesA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7342e+011.64e-04 1sesA a.2.7.1
d.104.1.1
2aucA/T0300-2aucA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2aucA/T0300-2aucA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8193e+011.39e-02
1u2uA/T0300-1u2uA-t2k-global-adpstyle1.a2m 1u2uA/T0300-1u2uA-t2k-global-adpstyle1.al 1.9326e+011.23e+00
1cs4A/T0300-1cs4A-t2k-local-adpstyle1.a2m 1cs4A/T0300-1cs4A-t2k-local-adpstyle1.al 2.3987e+015.00e+00 1azsA d.58.29.1
1hkmA/T0300-1hkmA-t2k-local-adpstyle1.a2m 1hkmA/T0300-1hkmA-t2k-local-adpstyle1.al 2.4837e+015.52e+00 c.1.8.5
d.26.3.1
1lw9A/T0300-1lw9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1lw9A/T0300-1lw9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.5819e+012.63e-07 d.2.1.3

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001