CreatePredAlphaCost pred_alpha2k alpha11 T0299.t2k.alpha.rdb 2 alpha alpha_prev sum CreatePredAlphaCost pred_alpha04 alpha11 T0299.t04.alpha.rdb 2 alpha alpha_prev sum CreatePredAlphaCost pred_alpha06 alpha11 T0299.t06.alpha.rdb 2 alpha alpha_prev sum SetCost wet6.5 1 near_backbone 5 way_back 1 dry5 1 dry6.5 10 dry8 10 dry12 5 \ phobic_fit 3 \ sidechain 3 \ n_ca_c 5 bad_peptide 10 \ bystroff 5 \ soft_clashes 20 backbone_clashes 2 \ break 50 \ pred_alpha2k .1 \ pred_alpha04 .1 \ pred_alpha06 .1 \ constraints 20 \ hbond_geom 5 \ hbond_geom_backbone 10 \ hbond_geom_beta 50 \ hbond_geom_beta_pair 100 \ missing_atoms 1 # from T0299.dssp-ehl2.constraints StrandConstraint Y4 V8 0.6189 HelixConstraint M21 N30 0.8127 StrandConstraint S38 I40 0.6593 StrandConstraint I45 F47 0.7919 HelixConstraint K53 H67 0.7871 StrandConstraint S73 L77 0.6316 HelixConstraint L79 E87 0.7923 StrandConstraint D101 T106 0.6283 HelixConstraint Q113 S120 0.6765 StrandConstraint V127 F130 0.6361 StrandConstraint G134 G138 0.8326 HelixConstraint Y150 L154 0.6412 HelixConstraint A168 L178 0.6475 # try12 sheets SheetConstraint (T0299)Y4 (T0299)L7 (T0299)E37 (T0299)I40 hbond (T0299)A5 .5 SheetConstraint (T0299)Y4 (T0299)V8 (T0299)Q72 (T0299)L76 hbond (T0299)L6 .5 SheetConstraint (T0299)A98 (T0299)F104 (T0299)L128 (T0299)G134 hbond (T0299)K100 .5 SheetConstraint (T0299)F130 (T0299)F136 (T0299)H151 (T0299)V157 hbond (T0299)K132 .5 include rr.0.3.constraints