PFRMAT RR
TARGET T0299
AUTHOR 5370-1100-4902
REMARK From group SAM-TO6 under the direction of
REMARK Kevin Karplus.
REMARK Residue-residue contact predictions
REMARK  by George Shackelford and Kevin Karplus
REMARK The value given is an approximation of the probability
REMARK as provided by the neural network.
REMARK The predictions are limited to a score >= .18 which
REMARK is an approximation of the probability.
REMARK
METHOD The predictor is an artificial neural network.
METHOD NN: con.aa5str2_5near5nsep5.entmi_epplcc.th62.47.net
METHOD Inputs may include separation and sequence length,
METHOD e-value statistic based on mutual information values,
METHOD a statistic based on propensity of residues in contact.
METHOD Other inputs are distributions from alignments and
METHOD secondary predictions from SAM-t04 and/or SAM-t06 of
METHOD the University of California, Santa Cruz
MODEL 1
MTRYALLVRGINVGGKNKVVMAELRQELTNLGLEKVESYINSGNIFFTSI
DSKAQLVEKLETFFAVHYPFIQSFSLLSLEDFEAELENLPAWWSRDLARK
DFLFYTEGLDVDQVIATVESLELKDEVLYFGKLGIFWGKFSEESYSKTAY
HKYLLKVPFYRHITIRNAKTFDKIGQMLKK
3 12 0 8 0.0682448715084
3 17 0 8 0.0184018379869
3 21 0 8 0.0258183430303
3 31 0 8 0.0241617078748
3 32 0 8 0.0202230436418
3 36 0 8 0.0542838671158
3 38 0 8 0.0174740754563
3 39 0 8 0.0274680817743
3 43 0 8 0.0281398312925
3 44 0 8 0.0237700437489
3 48 0 8 0.0319180238366
3 72 0 8 0.035713652591
3 73 0 8 0.0391527498821
3 74 0 8 0.0355171699233
3 106 0 8 0.016202468257
3 131 0 8 0.0262787110294
4 13 0 8 0.0568108163928
4 14 0 8 0.0190498404277
4 18 0 8 0.0150854773028
4 19 0 8 0.0328731117714
4 21 0 8 0.033677584681
4 24 0 8 0.055604594982
4 27 0 8 0.0216103934457
4 28 0 8 0.0426686185466
4 31 0 8 0.0280276344843
4 32 0 8 0.0249257131621
4 33 0 8 0.0635260344574
4 36 0 8 0.0766503609998
4 38 0 8 0.045093748163
4 39 0 8 0.0583898343885
4 40 0 8 0.0462798008231
4 41 0 8 0.0295923066429
4 42 0 8 0.0396107757036
4 43 0 8 0.0542100234641
4 44 0 8 0.0492068720892
4 45 0 8 0.0494872827839
4 46 0 8 0.0603156247747
4 47 0 8 0.0846248247713
4 56 0 8 0.0226615757184
4 59 0 8 0.0159398841354
4 60 0 8 0.0285472725862
4 63 0 8 0.0160027000347
4 64 0 8 0.0223412178852
4 68 0 8 0.0310148866999
4 72 0 8 0.0503304666828
4 74 0 8 0.0634346244745
4 75 0 8 0.0652455831029
4 76 0 8 0.0855795874036
4 77 0 8 0.0258652516407
4 85 0 8 0.0150810206595
4 86 0 8 0.0191189997243
4 89 0 8 0.0290099177023
4 100 0 8 0.0341499238095
4 101 0 8 0.07021555363
4 102 0 8 0.0827188778333
4 103 0 8 0.0795956492019
4 104 0 8 0.0575050117786
4 105 0 8 0.0344908407563
4 118 0 8 0.0198347626613
4 121 0 8 0.0150005408383
4 128 0 8 0.0177302836502
4 130 0 8 0.0306749456605
4 137 0 8 0.0376908407612
4 138 0 8 0.023768449767
4 140 0 8 0.0175401443798
4 163 0 8 0.0202379099629
4 164 0 8 0.0171218054547
4 178 0 8 0.0183027833969
5 14 0 8 0.0162539311014
5 19 0 8 0.0338467419447
5 21 0 8 0.0331792213581
5 24 0 8 0.0755241639868
5 27 0 8 0.019997771709
5 28 0 8 0.0698297449479
5 31 0 8 0.0290502552036
5 32 0 8 0.0164363607042
5 33 0 8 0.0444340348348
5 36 0 8 0.0890860222977
5 38 0 8 0.0689338620554
5 39 0 8 0.0800087832881
5 40 0 8 0.0782192946202
5 42 0 8 0.042843631254
5 43 0 8 0.0621571618315
5 44 0 8 0.0649492325891
5 45 0 8 0.0810695945127
5 46 0 8 0.0942332826492
5 47 0 8 0.076053756343
5 56 0 8 0.0259643712912
5 60 0 8 0.0523278236036
5 63 0 8 0.016676206186
5 64 0 8 0.0252854976498
5 68 0 8 0.0188035539578
5 72 0 8 0.0437687913652
5 74 0 8 0.0876667277951
5 75 0 8 0.103588980539
5 76 0 8 0.0661495985561
5 77 0 8 0.021856744976
5 86 0 8 0.0230340144706
5 89 0 8 0.0281780868582
5 100 0 8 0.0298359256328
5 101 0 8 0.070006058865
5 102 0 8 0.0933136526793
5 103 0 8 0.122737908087
5 104 0 8 0.0707438447764
5 105 0 8 0.0302978876138
5 118 0 8 0.0183479679045
5 130 0 8 0.0163800508536
5 137 0 8 0.0287742686219
5 163 0 8 0.0177129450307
5 164 0 8 0.0185903507452
5 174 0 8 0.0162046477833
5 178 0 8 0.0163040927362
6 18 0 8 0.0208885798836
6 19 0 8 0.0606334452489
6 21 0 8 0.0647969910518
6 24 0 8 0.132640764664
6 27 0 8 0.0304518207237
6 28 0 8 0.15093544803
6 31 0 8 0.0246623808449
6 33 0 8 0.0332579445462
6 36 0 8 0.147672014052
6 38 0 8 0.13618363343
6 39 0 8 0.105229480694
6 40 0 8 0.106585991827
6 41 0 8 0.0388183389839
6 42 0 8 0.0666437329475
6 43 0 8 0.091413561185
6 44 0 8 0.0877041375746
6 45 0 8 0.111568974452
6 46 0 8 0.142340957827
6 47 0 8 0.154170255395
6 56 0 8 0.0443666972317
6 60 0 8 0.072139717504
6 63 0 8 0.0243872075193
6 64 0 8 0.0394790282195
6 72 0 8 0.0449323981577
6 74 0 8 0.137198577012
6 75 0 8 0.143210491223
6 76 0 8 0.113740368173
6 77 0 8 0.0389305683223
6 82 0 8 0.0211438121702
6 86 0 8 0.0236565132008
6 102 0 8 0.0963828811073
6 103 0 8 0.109840642641
6 104 0 8 0.111165274136
6 105 0 8 0.0679781235157
6 118 0 8 0.023546365798
6 128 0 8 0.0191040032823
6 135 0 8 0.0169194348129
6 136 0 8 0.0161767043045
6 137 0 8 0.0351053370468
6 163 0 8 0.0197109200261
6 164 0 8 0.040665406182
6 170 0 8 0.0155053776795
6 174 0 8 0.0185498505926
7 17 0 8 0.0203556369123
7 18 0 8 0.0269119122096
7 19 0 8 0.100168100184
7 21 0 8 0.0831687710941
7 24 0 8 0.172337745511
7 25 0 8 0.0343607197843
7 27 0 8 0.0342146589931
7 28 0 8 0.148922476593
7 31 0 8 0.0160207217893
7 33 0 8 0.0210383491224
7 36 0 8 0.118229541708
7 38 0 8 0.14356084194
7 39 0 8 0.157751835151
7 40 0 8 0.155804249502
7 41 0 8 0.0589731016457
7 42 0 8 0.105641964175
7 43 0 8 0.138973427071
7 44 0 8 0.139702429816
7 45 0 8 0.141623991271
7 46 0 8 0.186011507858
7 47 0 8 0.146346731951
7 56 0 8 0.0577649284203
7 60 0 8 0.122188797585
7 63 0 8 0.024524647796
7 64 0 8 0.0588813663604
7 72 0 8 0.0323291085175
7 74 0 8 0.150838507906
7 75 0 8 0.149909769468
7 76 0 8 0.129670753477
7 77 0 8 0.0552155332756
7 82 0 8 0.0282123412041
7 85 0 8 0.0172563505398
7 86 0 8 0.0229648877042
7 100 0 8 0.0168384019776
7 101 0 8 0.0412818542871
7 102 0 8 0.0960250484342
7 103 0 8 0.0830324693759
7 104 0 8 0.148293992298
7 105 0 8 0.0546537359788
7 118 0 8 0.0205888462245
7 127 0 8 0.0170638365617
7 135 0 8 0.0172541710135
7 136 0 8 0.0165187598098
7 137 0 8 0.0278563627549
7 163 0 8 0.0309683684524
7 164 0 8 0.0584100031392
7 165 0 8 0.0239378998029
7 166 0 8 0.0278992376152
7 167 0 8 0.0236340998634
7 170 0 8 0.0230678459233
7 174 0 8 0.0314770438624
8 17 0 8 0.0246982942332
8 18 0 8 0.0358349903975
8 19 0 8 0.102401951971
8 21 0 8 0.0900638814026
8 24 0 8 0.14722602442
8 25 0 8 0.0392262682313
8 27 0 8 0.0404864898455
8 28 0 8 0.105546650563
8 36 0 8 0.108815614683
8 38 0 8 0.14817916054
8 39 0 8 0.14226776478
8 40 0 8 0.146524021776
8 41 0 8 0.0663229847514
8 42 0 8 0.101647575636
8 43 0 8 0.129193860115
8 44 0 8 0.129674006501
8 45 0 8 0.148708427594
8 46 0 8 0.155625333165
8 47 0 8 0.136833262383
8 56 0 8 0.0537985158901
8 60 0 8 0.0777059673855
8 63 0 8 0.0212832367918
8 64 0 8 0.0479671445281
8 72 0 8 0.0460852699699
8 74 0 8 0.131387374401
8 75 0 8 0.147146975929
8 76 0 8 0.137521602325
8 77 0 8 0.0507032632677
8 82 0 8 0.0298132845836
8 85 0 8 0.0163553603991
8 86 0 8 0.0227579302981
8 101 0 8 0.0299966900937
8 102 0 8 0.0783207889783
8 103 0 8 0.0661362611565
8 104 0 8 0.108459408522
8 105 0 8 0.0657091390658
8 118 0 8 0.0180548053545
8 128 0 8 0.0180686957682
8 135 0 8 0.0272856521715
8 137 0 8 0.0219632164614
8 163 0 8 0.0251841659428
8 164 0 8 0.065359113651
8 165 0 8 0.0299962997308
8 166 0 8 0.028394640686
8 167 0 8 0.0210962854852
8 170 0 8 0.0218193351966
8 174 0 8 0.0243829135272
9 18 0 8 0.0667657213587
9 19 0 8 0.0976265122975
9 21 0 8 0.116145654341
9 24 0 8 0.124728108354
9 25 0 8 0.0238378693056
9 28 0 8 0.0893651317827
9 36 0 8 0.112160699572
9 38 0 8 0.0961031210174
9 39 0 8 0.16578355215
9 40 0 8 0.195658351423
9 41 0 8 0.0738182780433
9 42 0 8 0.106138050381
9 43 0 8 0.112091084852
9 44 0 8 0.102790363073
9 45 0 8 0.127386805115
9 46 0 8 0.119077605143
9 47 0 8 0.101659611826
9 56 0 8 0.0390958219568
9 60 0 8 0.0674055912387
9 64 0 8 0.084509667711
9 71 0 8 0.015290450364
9 72 0 8 0.0284544312726
9 73 0 8 0.0306508082202
9 74 0 8 0.0859497815691
9 75 0 8 0.0929720851277
9 76 0 8 0.0881055607733
9 77 0 8 0.0402392599986
9 82 0 8 0.0455579547308
9 102 0 8 0.0485318695467
9 103 0 8 0.0583859307593
9 104 0 8 0.120261055384
9 105 0 8 0.0526693911552
9 136 0 8 0.0159503263434
9 137 0 8 0.0153709952457
9 163 0 8 0.0188906048881
9 164 0 8 0.0453578937362
9 166 0 8 0.024491174176
9 167 0 8 0.0161765741836
9 170 0 8 0.0252411914588
9 173 0 8 0.0151215858725
9 174 0 8 0.015491389675
10 19 0 8 0.102360963865
10 21 0 8 0.097687343852
10 24 0 8 0.119708366555
10 25 0 8 0.0235836129262
10 28 0 8 0.0929047475246
10 36 0 8 0.110863068178
10 38 0 8 0.0979794654342
10 39 0 8 0.119556775623
10 40 0 8 0.128629460398
10 41 0 8 0.0614366169488
10 42 0 8 0.110572573108
10 43 0 8 0.0887939007154
10 44 0 8 0.108094419196
10 45 0 8 0.124756734968
10 46 0 8 0.0989862764554
10 47 0 8 0.08162878939
10 56 0 8 0.0498272238234
10 60 0 8 0.103632245762
10 63 0 8 0.0175821083933
10 64 0 8 0.0421312189321
10 74 0 8 0.086631940765
10 76 0 8 0.0682822812879
10 77 0 8 0.0384419640723
10 82 0 8 0.0362663414198
10 101 0 8 0.0258674636972
10 103 0 8 0.0417688320249
10 104 0 8 0.0639121684419
10 136 0 8 0.0182402602699
10 137 0 8 0.015306520304
10 163 0 8 0.0262713266642
10 164 0 8 0.0353405307037
10 166 0 8 0.0168690454665
11 21 0 8 0.114978143919
11 24 0 8 0.145466788878
11 25 0 8 0.0324913693697
11 27 0 8 0.0300865060947
11 28 0 8 0.0899737726294
11 36 0 8 0.133127091797
11 38 0 8 0.100199329217
11 39 0 8 0.101799817173
11 40 0 8 0.0927368914707
11 41 0 8 0.0546709770076
11 42 0 8 0.0963770256635
11 43 0 8 0.0985500458966
11 44 0 8 0.112540978113
11 45 0 8 0.0921380096969
11 46 0 8 0.0933237370546
11 47 0 8 0.0701140592718
11 56 0 8 0.0730808174343
11 60 0 8 0.0634713836491
11 63 0 8 0.0225718247779
11 64 0 8 0.0375909729152
11 72 0 8 0.0336997052463
11 74 0 8 0.0740554235149
11 75 0 8 0.0701482160269
11 76 0 8 0.0551999187589
11 77 0 8 0.0248444526151
11 82 0 8 0.0222382596661
11 101 0 8 0.0214247433489
11 102 0 8 0.0283449670049
11 103 0 8 0.0239506516581
11 104 0 8 0.044099949239
11 105 0 8 0.0206150330701
11 135 0 8 0.0198655688014
11 163 0 8 0.0200709322255
11 164 0 8 0.0463120057637
11 165 0 8 0.0156541710111
11 166 0 8 0.0223099563217
11 167 0 8 0.0254125282487
11 170 0 8 0.0169629277478
11 174 0 8 0.017074864314
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12 24 0 8 0.0793123107853
12 28 0 8 0.0380519264586
12 36 0 8 0.067425434687
12 38 0 8 0.0522006303534
12 39 0 8 0.0619762936804
12 40 0 8 0.0637007218623
12 41 0 8 0.0351329877533
12 42 0 8 0.0585843652417
12 43 0 8 0.0677373997175
12 44 0 8 0.0643292061573
12 45 0 8 0.0697949375878
12 46 0 8 0.052963464552
12 47 0 8 0.0420726644947
12 56 0 8 0.0270592091499
12 60 0 8 0.029585898185
12 64 0 8 0.027735903265
12 72 0 8 0.0292480065508
12 74 0 8 0.051625495657
12 75 0 8 0.0385955068193
12 76 0 8 0.0308653126426
12 77 0 8 0.0188205672749
12 82 0 8 0.0293346996485
12 101 0 8 0.0224493158827
12 102 0 8 0.016409555784
12 103 0 8 0.0228793006348
12 104 0 8 0.0313679374273
12 105 0 8 0.0238437898098
12 135 0 8 0.0171520260505
12 136 0 8 0.0188651987683
12 163 0 8 0.0166690820627
12 164 0 8 0.0362959439409
12 166 0 8 0.0178818420524
12 167 0 8 0.0218903487171
13 24 0 8 0.0676518451783
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13 28 0 8 0.0219670550301
13 36 0 8 0.0502969605325
13 38 0 8 0.0328223645923
13 39 0 8 0.0403807665557
13 40 0 8 0.0331213175256
13 41 0 8 0.0210758239623
13 42 0 8 0.0783891024887
13 43 0 8 0.0464684762326
13 44 0 8 0.0513727356688
13 45 0 8 0.0417655790006
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13 47 0 8 0.0305216956857
13 56 0 8 0.0220043021583
13 60 0 8 0.0186126990221
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13 72 0 8 0.027079963445
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13 136 0 8 0.0235792213434
13 163 0 8 0.016525753812
13 164 0 8 0.0226315177738
13 167 0 8 0.0180254956055
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14 56 0 8 0.0154234665276
14 74 0 8 0.0161852272282
14 78 0 8 0.0152522273284
14 101 0 8 0.0159663637532
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15 43 0 8 0.0220495842566
15 44 0 8 0.0258882505225
15 47 0 8 0.0153989387244
15 74 0 8 0.0156121744673
16 36 0 8 0.0181123838846
16 39 0 8 0.032730629307
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16 41 0 8 0.0236830904094
16 42 0 8 0.0172289275449
16 70 0 8 0.0233302023332
16 72 0 8 0.017701201613
16 73 0 8 0.0399334757143
17 28 0 8 0.0162481407182
17 36 0 8 0.0199951042291
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17 43 0 8 0.0183340449605
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21 63 0 8 0.0207363708765
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END