Best Alignments for T0298

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1t4bA/T0298-1t4bA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1t4bA/T0298-1t4bA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.5121e-372.53e-152 c.2.1.3
d.81.1.1
1ys4A/T0298-1ys4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ys4A/T0298-1ys4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7319e-241.03e-134
1xygD/T0298-1xygD-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xygD/T0298-1xygD-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.3633e-215.91e-133
1u8fO/T0298-1u8fO-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1u8fO/T0298-1u8fO-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.2725e-192.49e-160
2b4rO/T0298-2b4rO-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2b4rO/T0298-2b4rO-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4201e-181.19e-160
2czcA/T0298-2czcA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2czcA/T0298-2czcA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.0435e-095.01e-85
1f06A/T0298-1f06A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1f06A/T0298-1f06A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3588e-061.48e-46 1dapA c.2.1.3
d.81.1.3
1drw/T0298-1drw-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1drw/T0298-1drw-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.6755e-069.59e-44 1drw c.2.1.3
d.81.1.3
1znqO/T0298-1znqO-t04-global-adpstyle1.a2m 1znqO/T0298-1znqO-t04-global-adpstyle1.al 5.2533e-061.08e-77
2bkaA/T0298-2bkaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bkaA/T0298-2bkaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.6513e-062.49e-39

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001