Best Alignments for T0298

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1t4bA/T0298-1t4bA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1t4bA/T0298-1t4bA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.5059e-412.53e-152 c.2.1.3
d.81.1.1
1ys4A/T0298-1ys4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ys4A/T0298-1ys4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.4181e-401.03e-134
1xygD/T0298-1xygD-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xygD/T0298-1xygD-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1023e-311.44e-122
1u8fO/T0298-1u8fO-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1u8fO/T0298-1u8fO-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5214e-133.83e-64
2b4rO/T0298-2b4rO-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2b4rO/T0298-2b4rO-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.7002e-136.42e-69
2czcA/T0298-2czcA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2czcA/T0298-2czcA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0658e-127.25e-63
1xygA/T0298-1xygA-t2k-global-adpstyle1.a2m 1xygA/T0298-1xygA-t2k-global-adpstyle1.al 1.3165e-096.96e-76
2cvoA/T0298-2cvoA-t2k-global-adpstyle1.a2m 2cvoA/T0298-2cvoA-t2k-global-adpstyle1.al 1.3546e-095.57e-74
2g17A/T0298-2g17A-t2k-global-adpstyle1.a2m 2g17A/T0298-2g17A-t2k-global-adpstyle1.al 9.4541e-082.06e-62
2bkaA/T0298-2bkaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bkaA/T0298-2bkaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0342e-051.99e-31

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001