Best Alignments for T0298

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1crwG/T0298-1crwG-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1crwG/T0298-1crwG-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.6300e-422.35e-161 1dssG c.2.1.3
d.81.1.1
1u8fO/T0298-1u8fO-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1u8fO/T0298-1u8fO-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5205e-332.49e-160
2b4rO/T0298-2b4rO-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2b4rO/T0298-2b4rO-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7185e-321.19e-160
1ys4A/T0298-1ys4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ys4A/T0298-1ys4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.7404e-292.02e-125
1xygD/T0298-1xygD-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xygD/T0298-1xygD-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.7104e-283.11e-129
1znqO/T0298-1znqO-t04-global-adpstyle1.a2m 1znqO/T0298-1znqO-t04-global-adpstyle1.al 1.0004e-201.08e-77
1cerA/T0298-1cerA-t04-global-adpstyle1.a2m 1cerA/T0298-1cerA-t04-global-adpstyle1.al 1.0189e-191.08e-77
1ywgO/T0298-1ywgO-t04-global-adpstyle1.a2m 1ywgO/T0298-1ywgO-t04-global-adpstyle1.al 1.5390e-191.08e-77
1xygA/T0298-1xygA-t04-global-adpstyle1.a2m 1xygA/T0298-1xygA-t04-global-adpstyle1.al 3.2497e-142.19e-73
2cvoA/T0298-2cvoA-t04-global-adpstyle1.a2m 2cvoA/T0298-2cvoA-t04-global-adpstyle1.al 7.3277e-144.16e-69

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001