Best Alignments for T0297

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1es9A/T0297-1es9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1es9A/T0297-1es9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2724e-231.06e-93 1wab c.23.10.3
1yzfA/T0297-1yzfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yzfA/T0297-1yzfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4789e-191.84e-78
1ivnA/T0297-1ivnA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ivnA/T0297-1ivnA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.4210e-191.16e-76 c.23.10.5
1vjgA/T0297-1vjgA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vjgA/T0297-1vjgA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.3804e-186.58e-71 c.23.10.6
1k7cA/T0297-1k7cA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1k7cA/T0297-1k7cA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.1576e-096.09e-43 c.23.10.4
1esc/T0297-1esc-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1esc/T0297-1esc-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.9758e-071.59e-44 1esc c.23.10.1
1zmbA/T0297-1zmbA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zmbA/T0297-1zmbA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4205e-051.09e-35
2apjA/T0297-2apjA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2apjA/T0297-2apjA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.6618e-043.66e-35
1vbuA/T0297-1vbuA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vbuA/T0297-1vbuA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.1865e-033.37e-19
1he2A/T0297-1he2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1he2A/T0297-1he2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.9191e-021.27e-18 1he2A c.2.1.2

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001