Best Alignments for T0296

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1to3A/T0296-1to3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1to3A/T0296-1to3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.4672e-011.02e-13 c.1.10.1
1h7xA/T0296-1h7xA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1h7xA/T0296-1h7xA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2604e+005.24e-15 1h7wA a.1.2.2
c.1.4.1
c.3.1.1
c.4.1.1
d.58.1.5
1xyzA/T0296-1xyzA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xyzA/T0296-1xyzA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3034e+002.27e-13 1taxA c.1.8.3
1zy9A/T0296-1zy9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zy9A/T0296-1zy9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8635e+003.36e-18
1u9yA/T0296-1u9yA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1u9yA/T0296-1u9yA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1622e+006.92e-11
1a0dA/T0296-1a0dA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1a0dA/T0296-1a0dA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.7824e+004.97e-17 1a0cA c.1.15.3
1j0aA/T0296-1j0aA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1j0aA/T0296-1j0aA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.0292e+001.04e-10 c.79.1.1
1i60A/T0296-1i60A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1i60A/T0296-1i60A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.0521e+002.63e-10 c.1.15.4
1tjyA/T0296-1tjyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tjyA/T0296-1tjyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.5089e+006.57e-18 c.93.1.1
1uqrA/T0296-1uqrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1uqrA/T0296-1uqrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.5242e+002.09e-09 c.23.13.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001