Best Alignments for T0296

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1vbuA/T0296-1vbuA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vbuA/T0296-1vbuA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.0777e-013.38e-16
1uqrA/T0296-1uqrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1uqrA/T0296-1uqrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.1698e-011.71e-09 c.23.13.1
1xyzA/T0296-1xyzA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xyzA/T0296-1xyzA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.9156e-011.20e-15 1taxA c.1.8.3
2chnA/T0296-2chnA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2chnA/T0296-2chnA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2832e+002.78e-12
1z41A/T0296-1z41A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z41A/T0296-1z41A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6930e+002.64e-14
1fzqA/T0296-1fzqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1fzqA/T0296-1fzqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0763e+004.49e-05 1hurA c.37.1.8
1ceo/T0296-1ceo-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ceo/T0296-1ceo-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1296e+005.67e-19 1ceo c.1.8.3
1u9yA/T0296-1u9yA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1u9yA/T0296-1u9yA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3751e+008.86e-12
1p0kA/T0296-1p0kA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1p0kA/T0296-1p0kA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.8828e+004.56e-13 c.1.4.1
1j0dA/T0296-1j0dA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1j0dA/T0296-1j0dA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.7439e+002.53e-11 c.79.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001