Best Alignments for T0296

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1z41A/T0296-1z41A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z41A/T0296-1z41A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.2274e-011.00e-20
1lt8A/T0296-1lt8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1lt8A/T0296-1lt8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.0062e-011.73e-22 c.1.26.1
1mjhA/T0296-1mjhA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1mjhA/T0296-1mjhA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.0973e-011.31e-11 1mjhA c.26.2.4
1ps9A/T0296-1ps9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ps9A/T0296-1ps9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.0634e-013.64e-19 c.1.4.1
c.3.1.1
c.4.1.1
1tr1A/T0296-1tr1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tr1A/T0296-1tr1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.1925e-015.55e-21 1e70M c.1.8.4
1ur4A/T0296-1ur4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ur4A/T0296-1ur4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.6857e-015.90e-24
1j0aA/T0296-1j0aA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1j0aA/T0296-1j0aA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1897e+002.92e-15 c.79.1.1
1nbaA/T0296-1nbaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1nbaA/T0296-1nbaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1910e+006.03e-19 1nbaA c.33.1.3
1i60A/T0296-1i60A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1i60A/T0296-1i60A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2099e+002.34e-14 c.1.15.4
1fobA/T0296-1fobA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1fobA/T0296-1fobA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5300e+002.25e-22 c.1.8.3

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001