Best Alignments for T0296

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1i60A/T0296-1i60A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1i60A/T0296-1i60A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.7009e-025.62e-23 c.1.15.4
1c93A/T0296-1c93A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1c93A/T0296-1c93A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0340e-011.25e-20 2ebn c.1.8.5
1j0dA/T0296-1j0dA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1j0dA/T0296-1j0dA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.7857e-012.67e-18 c.79.1.1
1p1xA/T0296-1p1xA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1p1xA/T0296-1p1xA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.3504e-012.10e-23 c.1.10.1
1gtzA/T0296-1gtzA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1gtzA/T0296-1gtzA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.5365e-013.11e-11 c.23.13.1
1ufoA/T0296-1ufoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ufoA/T0296-1ufoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.8784e-011.19e-04 c.69.1.27
1brwA/T0296-1brwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1brwA/T0296-1brwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.9814e-011.93e-09 1brwA a.46.2.1
c.27.1.1
d.41.3.1
1qtwA/T0296-1qtwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1qtwA/T0296-1qtwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3411e+001.33e-14 1qumA c.1.15.1
1ceo/T0296-1ceo-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ceo/T0296-1ceo-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7184e+001.31e-20 1ceo c.1.8.3
1dosA/T0296-1dosA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dosA/T0296-1dosA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8867e+003.13e-14 1dosA c.1.10.2

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001