Best Alignments for T0296

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1i60A/T0296-1i60A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1i60A/T0296-1i60A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.0644e-023.82e-22 c.1.15.4
1o60A/T0296-1o60A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1o60A/T0296-1o60A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8446e-015.65e-14 c.1.10.4
1c93A/T0296-1c93A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1c93A/T0296-1c93A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1657e-011.11e-21 2ebn c.1.8.5
1ur4A/T0296-1ur4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ur4A/T0296-1ur4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3655e-012.03e-19
1z41A/T0296-1z41A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z41A/T0296-1z41A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.2846e-017.66e-19
1mjhA/T0296-1mjhA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1mjhA/T0296-1mjhA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.3036e-011.04e-10 1mjhA c.26.2.4
1j0dA/T0296-1j0dA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1j0dA/T0296-1j0dA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.2092e-013.50e-17 c.79.1.1
1jclA/T0296-1jclA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jclA/T0296-1jclA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.5512e-017.33e-23 c.1.10.1
1uhvA/T0296-1uhvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1uhvA/T0296-1uhvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2178e+005.54e-19 b.71.1.2
c.1.8.3
2cw6A/T0296-2cw6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2cw6A/T0296-2cw6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4615e+001.45e-23

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001