Best Alignments for T0296

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1i60A/T0296-1i60A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1i60A/T0296-1i60A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.4496e-027.44e-22 c.1.15.4
1qtwA/T0296-1qtwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1qtwA/T0296-1qtwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.5325e-011.40e-14 1qumA c.1.15.1
1c93A/T0296-1c93A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1c93A/T0296-1c93A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.1235e-016.87e-17 2ebn c.1.8.5
1j0dA/T0296-1j0dA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1j0dA/T0296-1j0dA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.4617e-011.90e-16 c.79.1.1
1p1xA/T0296-1p1xA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1p1xA/T0296-1p1xA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5454e+001.17e-23 c.1.10.1
1pdo/T0296-1pdo-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1pdo/T0296-1pdo-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8382e+002.41e-06 1pdo c.54.1.1
1z41A/T0296-1z41A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z41A/T0296-1z41A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0219e+004.28e-23
7odcA/T0296-7odcA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 7odcA/T0296-7odcA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4995e+003.57e-14 7odcA b.49.2.3
c.1.6.1
1e6uA/T0296-1e6uA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1e6uA/T0296-1e6uA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.5061e+003.85e-15 1bsvA c.2.1.2
1jmvA/T0296-1jmvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jmvA/T0296-1jmvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.9022e+002.52e-10 c.26.2.4

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001